Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01256 ATGAAGAGATTGAGGTCCAGCGACGATCTCCATTCGTATGgagataaaaatgttttcaagGATTCGAATCTAAATCGGTCCTCTTCTTCGCACCGGGGGTTTTATTACAAATCCGATAATGTACGGAAGGGTTTGATCTCTTCGTCGTCTTCTTCGTCTCGGTATGATAGGGATCGAACGGTGGATGATGATAGGGACAGCTCCAGGTTGGTTCGAAAGCGATCAGACCATGACTTTGAGGGCTTTGATCGGAGAAAAGGGTTTGAGAGATATAGGGATGGTGGGGATAGTAGAGGGTATGGTAGTGGAGGAGATAGGAATTCGGTGCACAGGTCCGAGAGTTTTTGTGGGACCAGAAGGGAATTTCCGAAGGGCTTTCGGTCAGAGAGGGACCGGTCACGGCGTGAGGGCACCGTGTCATCATGGCGGAGATTTGGTGGAATAAAGGATTTTGATGACACTGGTAGAGGGAGTAGAGTTGGGTTGGAAGATAGAGGAATACGGTCACCGAAGGGTTTGAAGGATGTAAAGTCCCCAACTAGGTCAAAGGATTCTGAGAGTGAGCAATCTAAGATGAGGTCTCCACCAAGAGGTTGGAGAGATTCCAAGTCCAAGTCCAAGTCCAAGTCACCATCTTGGTCCAAGGATTCAGAGAGTGAGCAATCAAAAAGCGAGCAATCCAAGAGTGTTGAGGTGAAGAAAACCGAGGAGGTGCAAGTTGAGAGTGGGAGTAGTAGTGAAATGGAGGAAGGGGAGCTGGAACCTGAACCCATGCCAGAAGCTGAATCAGACACTGCTAAAAATGCACCTGAAAATGAAGACCGGGCCTCTACCCGTTTGGATATTGATGAGAAGGAAGCTCAGAATGAATGCCAGGTAGGTACTTCAGTTGAGGAAACATCAGATTTATCAGATAAGCAACGGATAGAACCGAATGAGGATTTCAATACCGATGAGAAAGATGTGGTGAAAGAAGTTGATAAGCTGCCCGATGTTCAAGTTGATCCAGCCAATAAAATGCACATTGctgagaatgaaaatgaaactgtGCCTCATGATgatgacaaagaaaaacagcCTTTGAAGGTTGATATTGAATGTAAGGAGGAAACACAGGGGGGTGCAGATGTGGAGGAGCCATTGTTTAATGAAGAGGAGCATAAGCAGGACAAGGATGTAAATCTTGAAACAAGGGTAGTTGTTGACAATCCGGAGTTCCAAGATCATCACGAAGCTTCAACAGAAAATGAGGTGCCTGAAGTAAATAGCGAAATGATAGAATGTGTGCCCGGCAGTGCAAAGGATAAGGGCAAAGGTGTCTCTGTTACACCTACTGATGTTCATTCTTCAGAAGATGGTCTATGGACGGATAGAGGATTGAGAGATCTTACAACTTGCTCAGATGATGCGATGGAAGGTCCAAGCACTAGGGGGTTTGAATTGTTTTCCAGATCTCCTGTTAGGAAAGTAGAGACAACGGCTCAATCCAATCTCAGCAAGCAGAAGGATGGAAGTCTTGGAATGGAGCAGCTTGATCTATCTCTTAGCTTGCCAAATGTTTTGTTACCCATCGGTGCTCATGAGACAACACAAGTCCCTGGATCCCCCAGTCAAGCACGGAGTGTACAGTCCTTAAGTAACACATTTCGTACTAACTCTGATGGATTTACTGCATCAATGTCATTTTCTGGTTCTCAATCATTTTATCACAATCCAAGCTGTTCTCTCACACAAAATTCATTGGATTATGAACAATCTGTTGGCAGTCGCCccttatttcaaaatatggaTCAACTTGCTCAAGGAGGTTTGCTAGGCCAGCCTCAAAATGATTCCAAACTGAAAGACTTTTCTTTTGGTCAGAGAACTTCAGTAAATGGGAGTGGTTCTATTTACCAGCCTCAAGCATCATGGGGCATTTCGGACAGTCAAGCCATGAAAGGTCAACATTCCAGGGTTCTAGAAGGGAGCCCAAAAACGGCCAATGGACTTGACAGGCAATTGAGTTTTTATAAGCAGTTATCAGGGCAGTCAAGGCACCATGATGATGTTAGATCTCCTTCACAGAGTGTTGGGTCTCATGATATTGGGTCAAGTTATAGTTTTGGCAAGAAGAGGGAAATGAGGGACAGGAGTAATGGTAGTTTATATCGAACCGCTAGCCAGAAGGAGCATGAGCAATTTCTGATGGGTAGCACTGATTCTGTTGAGACAATGATTGCAAGAATAGTTTCTGATCCGGTTCATGCAATGgctaaaaaatttcatgaaatgaCTGGACAATCCCTTATGTCTTTGAAAGAGGGCATTCGAGAGATCTTGCTTAATGCAGACAAACACGGGCAAGTGCTTGCTTTTCAAAAAGTTCTGCAGAACAGGTCTGATATAACCTTGGAGGTTCTTCTAAAGTCCCATCGAGTTCAGTTGGAAATTATGGTTGCTTTGAAAACTGGTTTAACTGATTTTCTTCACCTTGACAGCAGCATCTCATCTTCTGATTTAGCTGAGATTTTTCTGAACTTAAGATGTAGGAATCTTACATGTAGAAGTCAGTTGCCTGTGGATGAATGTGATTGCAAGGTTTGTGTACTGAAGAATGGTTTTTGTAGGGAATGTATGTGTCTTGCGTGCTCTAAGTTTGACATGGCATCAAATACATGTAGTTGGGTGGGGTGCGATGTTTGTCTTCATTGGTGCCATGCGGACTGTGGACTACGGGAATCTTATATTAGAAATGGGCATAGTGCTAATGGCGCGCAAGGGACAACTGAGATGCAGTTTCACTGTATTGCCTGTGATCACCCCTCTGAGATGTTTGGCTTTGTTAAGGAggttttccaaaattttgcgAAAGAATGGTCAGTTGAAGCATTTCGCAAGGAGGTCGAATATGTGAAGAGAATTTTTTCTGCCAGCAAGGACATGAGAGGGAGACAGTTGCATGGGATTGCCGAACGAATGTTGTCAAGGTTGGCAGATAAGTCTAATCTTCCCGAAGTTTACAGCTACATCATGTCTTTCCTTTCTGATGGTGACTCTTCCAAATTAGCCATGACACAGACTTCTTCTGTGAAGGAGCaagttaaagaaaacaaagtgcTCGCTGGGTCCAGCCAGGAAGCTCCATGGTTAAAATCTGTTTATTCAGAAAAACCGCCTTTGTTAGAAAGGCCAGTAAGCATGCTTCCTATCTATGACAGGGATGATAAAAGAACTCATATGCAAGACTTGCAGTTGAGTATCCCAAAGGACTTCTGTTTTGATGAATTGGAGAGTATAGTAAAAATCAAACATGCAGAGGCTAAAATGTTTCAAGGGCGTGCCGATGATGCAAGAAGAGAAGCTGAAGGGCTAAAACGCATTGCCCTTGCCAAGAacgaaaaaattgaagaagagTATACAAATAGAATTGCAAAGTTGCGATTGGGGGACGCCGAGGAAATGCGTAAACGGAAACTTGAAGAACTGCAGGCGTTAGAAAGAGTACATCTGGAGTACTTCAACATGAAAATGAGAATGGAGGCAGATATCAAAGATCTCTTGTCGAAAATGGAAGCTATAAAAAGGAGCCCTGCCATGTG 3581 0.4233 MKRLRSSDDLHSYGDKNVFKDSNLNRSSSSHRGFYYKSDNVRKGLISSSSSSSRYDRDRTVDDDRDSSRLVRKRSDHDFEGFDRRKGFERYRDGGDSRGYGSGGDRNSVHRSESFCGTRREFPKGFRSERDRSRREGTVSSWRRFGGIKDFDDTGRGSRVGLEDRGIRSPKGLKDVKSPTRSKDSESEQSKMRSPPRGWRDSKSKSKSKSPSWSKDSESEQSKSEQSKSVEVKKTEEVQVESGSSSEMEEGELEPEPMPEAESDTAKNAPENEDRASTRLDIDEKEAQNECQVGTSVEETSDLSDKQRIEPNEDFNTDEKDVVKEVDKLPDVQVDPANKMHIAENENETVPHDDDKEKQPLKVDIECKEETQGGADVEEPLFNEEEHKQDKDVNLETRVVVDNPEFQDHHEASTENEVPEVNSEMIECVPGSAKDKGKGVSVTPTDVHSSEDGLWTDRGLRDLTTCSDDAMEGPSTRGFELFSRSPVRKVETTAQSNLSKQKDGSLGMEQLDLSLSLPNVLLPIGAHETTQVPGSPSQARSVQSLSNTFRTNSDGFTASMSFSGSQSFYHNPSCSLTQNSLDYEQSVGSRPLFQNMDQLAQGGLLGQPQNDSKLKDFSFGQRTSVNGSGSIYQPQASWGISDSQAMKGQHSRVLEGSPKTANGLDRQLSFYKQLSGQSRHHDDVRSPSQSVGSHDIGSSYSFGKKREMRDRSNGSLYRTASQKEHEQFLMGSTDSVETMIARIVSDPVHAMAKKFHEMTGQSLMSLKEGIREILLNADKHGQVLAFQKVLQNRSDITLEVLLKSHRVQLEIMVALKTGLTDFLHLDSSISSSDLAEIFLNLRCRNLTCRSQLPVDECDCKVCVLKNGFCRECMCLACSKFDMASNTCSWVGCDVCLHWCHADCGLRESYIRNGHSANGAQGTTEMQFHCIACDHPSEMFGFVKEVFQNFAKEWSVEAFRKEVEYVKRIFSASKDMRGRQLHGIAERMLSRLADKSNLPEVYSYIMSFLSDGDSSKLAMTQTSSVKEQVKENKVLAGSSQEAPWLKSVYSEKPPLLERPVSMLPIYDRDDKRTHMQDLQLSIPKDFCFDELESIVKIKHAEAKMFQGRADDARREAEGLKRIALAKNEKIEEEYTNRIAKLRLGDAEEMRKRKLEELQALERVHLEYFNMKMRMEADIKDLLSKMEAIKRSPAM 1193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01256 1193 MobiDBLite consensus disorder prediction 370 396 - -
Bva07g01256 1193 MobiDBLite consensus disorder prediction 301 334 - -
Bva07g01256 1193 CDD PHD_OBE1_like 873 932 - -
Bva07g01256 1193 MobiDBLite consensus disorder prediction 18 35 - -
Bva07g01256 1193 PANTHER PROTEIN OBERON 4 1 1190 - -
Bva07g01256 1193 Coils Coil 1170 1190 - -
Bva07g01256 1193 MobiDBLite consensus disorder prediction 1 16 - -
Bva07g01256 1193 MobiDBLite consensus disorder prediction 674 728 - -
Bva07g01256 1193 MobiDBLite consensus disorder prediction 88 358 - -
Bva07g01256 1193 MobiDBLite consensus disorder prediction 1 70 - -
Bva07g01256 1193 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1127 1149 IPR004082 -
Bva07g01256 1193 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 754 776 IPR004082 -
Bva07g01256 1193 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 808 823 IPR004082 -
Bva07g01256 1193 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 834 855 IPR004082 -
Bva07g01256 1193 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 953 972 IPR004082 -
Bva07g01256 1193 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1088 1108 IPR004082 -
Bva07g01256 1193 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 793 808 IPR004082 -
Bva07g01256 1193 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 880 900 IPR004082 -
Bva07g01256 1193 Coils Coil 1142 1162 - -
Bva07g01256 1193 MobiDBLite consensus disorder prediction 146 240 - -
Bva07g01256 1193 Pfam PHD - plant homeodomain finger protein 843 966 IPR032881 -
Bva07g01256 1193 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 1 1190 IPR004082 -
Bva07g01256 1193 MobiDBLite consensus disorder prediction 341 358 - -
Bva07g01256 1193 MobiDBLite consensus disorder prediction 112 139 - -
Bva07g01256 1193 MobiDBLite consensus disorder prediction 714 728 - -
Bva07g01256 1193 MobiDBLite consensus disorder prediction 431 454 - -
Bva07g01256 1193 Coils Coil 1112 1132 - -
Bva07g01256 1193 MobiDBLite consensus disorder prediction 55 70 - -
Bva07g01256 1193 Pfam Coiled-coil region of Oberon 1066 1181 IPR032535 -
Bva07g01256 1193 MobiDBLite consensus disorder prediction 266 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01256 Bva-Chr7 13449967 13454887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01256 843 940 PHD Gene Family AT5G57380 32.653 1.01e-09 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01256 - - gmx:100817003 1429.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01256 07 13449967 13454887 Bva07g01256 07 13449967 13454887 ECH