Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01238 ATGGAAGAAATAGAACCTCGGCGTAAGCGCCCCAAAATTGTCAGGGGTGAAGATGATTATATGGCTGGAAACATTATTGAGATTGAGCTTCACAAGTTCATGACCTTTGATTACTTAAAATGCAAACCTGGTCCTCGGTTGAACCTTGTTATTGGACCCAATGGCTCTGGGAAAAGTTCTCTTGTGTGCGCCATTGCACTTGGCCTTGGTGGTGAGCCTCAGCTGCTTGGGCGAGCAAAAGGTATTGGAGCATATGTGAAACGTGGAGAAGAATCTGGTTACATTAAGATTACATTGAGAGAGGATCGCAAGGAGGAGCATTTTACCATTGTGCgtaaaataaacacaaacaaCAAATCTGAATGGTTGTTTAATGGCAAAGTAGTACCCAGAAAGGACATCACTGATATCATTCAAAGGTTCAATATCCAAGTCAATAATTTGACTCAATTTTTACCCCAAGACAGAGTCTGTGAGTTTGCCAAATTAACTCCTGTGCAACTTTTGGAAGAGACTGAAAAAGCTGTTGGTGATCCTCAACTACCCATTAAACATAATGCACTTGTTCAAAAAAGCCGTGCATTGAAGGATGTTCAGTTGACTGTGGAAAAAAATGAGGAAACTCTAAATCAGTTGAAGGAACGTAATGCTGAGCTAGAGAAAGATGTTGAGCGTGTCCGTCAAAGGGAGGAACTTCTTGCAAAGGTTGAAtccatgaaaaagaaattaccatGGCTAAGATACGATATGAAGCAAGCTGAATATCAGAAAGCTAAGGAGCGAGAGAAGGATGCAAAAAAGGCATTGGAGGAAGCTGCAAAGCATTTACAGGATTTTAGTGAACCTATTGAgaaacaaaagaagaagaaggctCCAATGGATGCTGAATGTAAGAAATGTACCAACCTCATTGATGGAAATTCCAGGAAGCGAACAGAACTTATGGAGGAAGCAAACCGGCtgGGTGTAGAATTGGGAGGGAAGTACAAAGATATGGAAGAACTAAGGAGACAGGAAGAAACTCGGCaacaaagaatatttaaaactaaggAGGAACTAGCTGCTGCTGAACTCGAGCTTCAGAATCTGCCCCATTATGAACCTCCAACGGCTGAGATTaaaaaattaagagatgaGATTGTGGCCTTGGATGATTCTGCACGTCAAATGAATCTTAAAAagtcagaaaaggaaaaacttttatttcaaaagaagGAAGCATTGACACAGTGTACACGGAGGTTGAAAGAGATGggtgataaaaatagaaagtgtTTACATGCACTACAAAAATCTGGGGttgaaaagatttttgaaGCTTATACATGGGTGCAAGAACATCGTGATGAATTTAATAAGAAGGTCTTTGGCCCAGTGTTACTTGAGGTTAATGTATCAAATCAAGATCATGCTAAATTTTTGGAGGGTCAAGTTGCTTACTACATTTGGAAGTCTTTCATAACTCAAGATTCTGGTGATCGAGATCTTCTGGTGAAACACTTAAAGTCCTTTGATGTTCCAATTTTAAATCATACTGGTAATGATGGTCATAGAAGAGATCCTTTTGAAATCTCCAAAGATATGCATGATCTTGGCATCTATTCCCGGCTTGACCAAATTTTTGATGCTCCCACGGCTGTCAAGGAGGTTTTGACTGAGCAATTTGGTCTAGATCATTCGTATATTGGATCCAGAGAAACTGATCAGAAGGctgatttggtccaaagatTGGGGATTTTTGACCTTTGGACTCCTGATAATCACTACCGTTGGTCTAAGTCTAGATATGGAAATCATGTCTCAGCAGTTGTTGAAGCAGTGGGACGCCCACAACTTCTATTGTATAATTTGGATGTGGGAGAAATTGAGAAGCTAATGTCACAGAAAAAGGAGCTTGAAGAAGATATTGCCAACTTGGAGGAAAGTTATAAAGGGTTTCAAGATGAGGAAAGACACTTACGGAATGAAGAAGCTAATCTTCGTAGACAACGAGAGAGAATTCTTAAAGATGCACAAAATGCTAAAACAAGACATGAAGAGATCAAGCGCCTTATTAGTCAAAGGAAACAGAAATTGGAAATGTTGGAGAAGGAGGTTGACATGGACGCTGCTATGGCAAATCTCATTGATCAAGTCACAAACTGTAACATTCAGCGACTTCATaatgcaattaaaattaagGATCTTCTTGTTGAAGCTGCACATTATAAAAAGAGTTTTGTTGAAAAACGTATGGCGTCCCTCGAATTAGATACTAAGGTAATCTA 2267 0.3692 MEEIEPRRKRPKIVRGEDDYMAGNIIEIELHKFMTFDYLKCKPGPRLNLVIGPNGSGKSSLVCAIALGLGGEPQLLGRAKGIGAYVKRGEESGYIKITLREDRKEEHFTIVRKINTNNKSEWLFNGKVVPRKDITDIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPIKHNALVQKSRALKDVQLTVEKNEETLNQLKERNAELEKDVERVRQREELLAKVESMKKKLPWLRYDMKQAEYQKAKEREKDAKKALEEAAKHLQDFSEPIEKQKKKKAPMDAECKKCTNLIDGNSRKRTELMEEANRLGVELGGKYKDMEELRRQEETRQQRIFKTKEELAAAELELQNLPHYEPPTAEIKKLRDEIVALDDSARQMNLKKSEKEKLLFQKKEALTQCTRRLKEMGDKNRKCLHALQKSGVEKIFEAYTWVQEHRDEFNKKVFGPVLLEVNVSNQDHAKFLEGQVAYYIWKSFITQDSGDRDLLVKHLKSFDVPILNHTGNDGHRRDPFEISKDMHDLGIYSRLDQIFDAPTAVKEVLTEQFGLDHSYIGSRETDQKADLVQRLGIFDLWTPDNHYRWSKSRYGNHVSAVVEAVGRPQLLLYNLDVGEIEKLMSQKKELEEDIANLEESYKGFQDEERHLRNEEANLRRQRERILKDAQNAKTRHEEIKRLISQRKQKLEMLEKEVDMDAAMANLIDQVTNCNIQRLHNAIKIKDLLVEAAHYKKSFVEKRMASLELDTKVI 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01238 755 Coils Coil 373 393 - -
Bva07g01238 755 Gene3D - 577 694 - -
Bva07g01238 755 CDD ABC_SMC5_euk 23 180 - -
Bva07g01238 755 Pfam RecF/RecN/SMC N terminal domain 25 148 IPR003395 -
Bva07g01238 755 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 286 IPR027417 -
Bva07g01238 755 Coils Coil 622 698 - -
Bva07g01238 755 Gene3D - 24 233 IPR027417 -
Bva07g01238 755 Coils Coil 195 236 - -
Bva07g01238 755 Coils Coil 248 275 - -
Bva07g01238 755 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 19 754 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01238 5 754 Structural Maintenance of Chromosomes family AT5G15920 61.467 0.0 909
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01238 K22803 - gmx:100778678 1010.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01238 07 13328377 13336779 Bva07g01238 07 13328377 13336779 ECH