Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01215 ATGGAGCAGTATCTCAGAGAAAACTTCGACGTCCAGCACAAGCGGCCGTCGGAGGAAGCCCTGCGCCGATGGAGATCCGCCGTTTCCGTCGTCAAGAACCCCCGCCGCCGTTTCCGCATGGTCGCCGATCTCGCTAAACGCGCCGAAGCTGAACGCAAGCGTCGAAAGCTCCAGGAAACTATACGAGTAGCTCTATATGTGCAAAAAGCAGCGTTGCATTTTATTGACGCTGGGAAACGTGGTGGGCACATGCTCTCCAAAGGAGTAAAGGATGCAGGATTTGGAATTGAACCTACTGATTTGGCATCCATTGTTCGAACTCATGACAAAAAAGCCTTGGATCATTTTGGAGGAGTTGAAGGACTAGCAAAAGAACTCTCTGTTTCCTTGAAAGACGGCATCGTTTCACTCGACATTCCATCTATTTTCCAAAATACAAGCTCAGAGGTTGTTAAAGGggaaaatggaaagagaaagatcaTGGGTACTCCCACAGAGATGGCATTAGTAGAATTTGGCTTGCTTTTAGGAGGTGATCCTAAGACTTACAATGACGAGTATAAGATAGTAAAGGTTGAGCCTTTTAATTCAAACAGGAAGAAGATGTCTGTGCTTGTTGCTCTTCCTGGTGGCTCCAATAGGTTTCGCGCATTCTGTAAAGGAGCATCAGAAATAGTTGTTAAAATGTGTGACAAAGTAATTAATGCAGATGGCAAAGTTGTTAGTCTCCATGAAgaacaaaggaaaaacatCTCACAAGTTATCAATGGATTCGCTTCTGAAGCTCTGAGAACTCTCTGCATTGCTTTCAAGGATATTGAAGGGAATTCCATTAGTGATACTATTCCTGAAAGCGGTTACGCAATCATAGCCATTGTTGGGATTAAAGATCCAGTGAGACCGGGGGTAAAGGAAGCTGTTAAGTTATGCCAAGAAGCTGGAATTACTGTGAGAATGGTCACTGGTGATAACATAATAACTGCTAAAGCAATTGCTAGAGAATGTGGCATCTTGACAGATGGGTTGGCTATAGAGGGACCAGATTTCCGGAACAAGAGCCCGCGGGAGATGGAGCAGATAATACCAAAAATTCAGGTAATGGCTCGATCCTTGCCTCTGGACAAGCACACATTAGTAACCCATTTGAGGAAAGACTTTAATGAAGTTGTGGCAGTAACTGGTGATGGAACCAATGATGCTCCAGCATTGCATGAAGCCGATATTGGACTTGCTATGGGCATAGCAGGAACGGAGgttgcaaaagaaaatgccgATGTCATAGTAATGGACGATAACTTCACAACCATAGTGAACGTTGCCAGATGGGGCCGTTCTGTTTATATCAATATTCAGAAGTTTGTTCAGTTTCAGCTAACAGTTAATGTGGTTGCTCtcattctcaattttatttctgcATGTGTGTCAGGTAATGCCCCTCTTACCGCTGTTCAAATGCTCTGGGTAAACATGATCATGGACACTCTTGGAGCATTGGCACTGGCAACAGAACCACCCCATGATGGGTTAATGAAAAGGCCACCTATTGGGAGGAATGCCAAGTTCATTACTGGGGTTATGTGGAGGAACATAATTGGTCAGAGTATTTATCAGATTATCATCCTTTTGGTTCTTAATTTCCGTGGGAAGCAGATTCTTAAGCTCAATGGACCTGGTGCTACAACAGTTCTCAACACTCTCATATTCAATGCCTTTGTCTTTTGCCAGgtttttaatgagataaACAGCCGTGATATGGAGAAGATTAATGTGTTCCGAGGCATTTTGAGTAGTTGGGTTTTCATGATGGTGATTGTGTCGACGGTATGTTTCCAAGTGATAATAGTTGAACTTTTGGGGGCATTTGCGGAAACAGTACCACTCAGCTGGGATTTATGGTTGGTCAGCGTCTTGATTGGAGCTGCAAGTTTACCCATGGCTGTTGTCTTGAAGTTCATTCCAGTTCCAGAGTCAGTTTACATTGCCAAGCATCATGGTGGCTACGAGCCTCTCCCCACTGGCCCAGAGCTGGCATG 2033 0.4279 MEQYLRENFDVQHKRPSEEALRRWRSAVSVVKNPRRRFRMVADLAKRAEAERKRRKLQETIRVALYVQKAALHFIDAGKRGGHMLSKGVKDAGFGIEPTDLASIVRTHDKKALDHFGGVEGLAKELSVSLKDGIVSLDIPSIFQNTSSEVVKGENGKRKIMGTPTEMALVEFGLLLGGDPKTYNDEYKIVKVEPFNSNRKKMSVLVALPGGSNRFRAFCKGASEIVVKMCDKVINADGKVVSLHEEQRKNISQVINGFASEALRTLCIAFKDIEGNSISDTIPESGYAIIAIVGIKDPVRPGVKEAVKLCQEAGITVRMVTGDNIITAKAIARECGILTDGLAIEGPDFRNKSPREMEQIIPKIQVMARSLPLDKHTLVTHLRKDFNEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKENADVIVMDDNFTTIVNVARWGRSVYINIQKFVQFQLTVNVVALILNFISACVSGNAPLTAVQMLWVNMIMDTLGALALATEPPHDGLMKRPPIGRNAKFITGVMWRNIIGQSIYQIIILLVLNFRGKQILKLNGPGATTVLNTLIFNAFVFCQVFNEINSRDMEKINVFRGILSSWVFMMVIVSTVCFQVIIVELLGAFAETVPLSWDLWLVSVLIGAASLPMAVVLKFIPVPESVYIAKHHGGYEPLPTGPELA 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01215 677 PANTHER CATION TRANSPORTING ATPASE 141 661 - -
Bva07g01215 677 PANTHER CATION TRANSPORTING ATPASE 3 140 - -
Bva07g01215 677 SUPERFAMILY Calcium ATPase, transmembrane domain M 443 653 IPR023298 -
Bva07g01215 677 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 137 654 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Bva07g01215 677 Pfam Cation transporting ATPase, C-terminus 478 652 IPR006068 -
Bva07g01215 677 PANTHER CALCIUM-TRANSPORTING ATPASE 141 661 - -
Bva07g01215 677 PANTHER CALCIUM-TRANSPORTING ATPASE 3 140 - -
Bva07g01215 677 Gene3D - 107 296 IPR023299 GO:0000166
Bva07g01215 677 SUPERFAMILY HAD-like 281 498 IPR036412 -
Bva07g01215 677 PRINTS H+-transporting ATPase (proton pump) signature 251 269 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva07g01215 677 PRINTS H+-transporting ATPase (proton pump) signature 393 409 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva07g01215 677 PRINTS H+-transporting ATPase (proton pump) signature 425 450 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva07g01215 677 Gene3D - 16 77 - -
Bva07g01215 677 Coils Coil 40 60 - -
Bva07g01215 677 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 130 303 IPR023299 GO:0000166
Bva07g01215 677 Pfam haloacid dehalogenase-like hydrolase 254 407 - -
Bva07g01215 677 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 188 339 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva07g01215 677 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 360 476 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva07g01215 677 Gene3D - 411 657 - -
Bva07g01215 677 Gene3D - 297 410 IPR023214 -
Bva07g01215 677 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 49 IPR024750 GO:0005516
Bva07g01215 677 PRINTS P-type cation-transporting ATPase superfamily signature 313 323 - -
Bva07g01215 677 PRINTS P-type cation-transporting ATPase superfamily signature 291 302 - -
Bva07g01215 677 PRINTS P-type cation-transporting ATPase superfamily signature 393 412 - -
Bva07g01215 677 PRINTS P-type cation-transporting ATPase superfamily signature 417 429 - -
Bva07g01215 677 Pfam Cation transport ATPase (P-type) 147 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01215 Bva-Chr7 13186171 13195199 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01215 124 674 Primary Pumps ATPases AT3G57330 69.746 0.0 788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01215 K01537 - gmx:100805063 887.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01215 07 13186171 13195199 Bva07g01215 07 13186171 13195199 ECH