Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01211 ATGGATCCAGGTTTACCATACCAATGCCCCAAAGATCTGGGACGGGAACAGAGGGGCATAAATCTGGCCTGTCATCTTAATGCCTGTGCTGGCTATGTTGCTGCTGGCAACTTTACGAATGCAGATTTAGAGTTTCAGTGTATTTCTCATCTTAGTTCCCCAGATGGGGATGCAATCCAGCGGATGGCCGCTTATATGAGTGAAGCACTCTCTTTCAGGATGTTCAAACACTTCCCTGGTGCATGTGAAATTATTATGAATAGCTCCTCAAGAATGTCAAATTCCGAGGAACTTCTTGTTAAAAACTTGTTTTTCAAATTGTGTCCTTTTTTGAAAGTCTTATACTTGATCATAAATCAGGCCATTGCTCAAATAatggaaggagaaaaaatggTTCATATAATTGATCTCAATGCTTCTGAGCCAGCCCAGTGGATCAATCTTTTAAAGACACGCAAAGGAGGCCCTCCTCAACTGAACATTACGGTTATTCATGAAAAGAAGGAGGTTTTAGAACAGATAGGCCTTCAGTTGATTAGAGAAGCTGAAAATTTGGAATTCCCTTTCCGATTTAATCCTATAGTCAGCAAATTACAAGATCTTGACTTTGAAATCTTGCCTGTCAAGCCAGGAGAAGCTCTTGCCATCAGCTCTGTACTTCAGCTACATTCTCTACTTGCAGTTGATGATGAAATGCTTGCATGGAGCTCCCCAGCAGCATTACAGAATCTGCAGAGAGCGGTGCACATGAACCAACGGACATTTGGAGAGTTGATTCAGAAGGATAAGATCAATGCATATATCTTGAGCCCTGATTCAGCATTATCACCTCTTTCTCTAGGTGCTTCCCCCAAGATGGGCAACTTTCTACATGACCTGTGGAAACTTAGACCAAAATTGATCGTGATTACTGAACATGAAGCTGATCTTAATGGGTCTAATTTAATAGAGAGGGTTGACAGGGCGTCTCACTATTATGGTTCACTGTTTGATTGCTTGGAGTCAACTGTTCCAAGAACATCATCAGAGCGACAAAAACTGGAGAGGATGCTTTTCGGagaggaaattaaaaatattattgcttGCGAGGGAAtcaagagaaaggaaagacaTGAGAAACTTGAGAAATGGATTCCACGGCTTGAATCTTCTGGGTTTGGGAAGATATCTTTCTGCCAAGATGCTATGCATGAAGCAAAGAACTTGTTGCAAAACTATGGACATGGATTCAAGCTTCGAGAAGAGAATGGTTGTCTGTTCATCTGTTGGAATGATAAAGCCCTTTTTTCGATATCAGCCTGGAGGTTTAGatg 1313 0.3983 MDPGLPYQCPKDLGREQRGINLACHLNACAGYVAAGNFTNADLEFQCISHLSSPDGDAIQRMAAYMSEALSFRMFKHFPGACEIIMNSSSRMSNSEELLVKNLFFKLCPFLKVLYLIINQAIAQIMEGEKMVHIIDLNASEPAQWINLLKTRKGGPPQLNITVIHEKKEVLEQIGLQLIREAENLEFPFRFNPIVSKLQDLDFEILPVKPGEALAISSVLQLHSLLAVDDEMLAWSSPAALQNLQRAVHMNQRTFGELIQKDKINAYILSPDSALSPLSLGASPKMGNFLHDLWKLRPKLIVITEHEADLNGSNLIERVDRASHYYGSLFDCLESTVPRTSSERQKLERMLFGEEIKNIIACEGIKRKERHEKLEKWIPRLESSGFGKISFCQDAMHEAKNLLQNYGHGFKLREENGCLFICWNDKALFSISAWRFR 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01211 437 PANTHER TRANSCRIPTION FACTOR GRAS, SCARECROW-LIKE PROTEIN 3-RELATED 6 436 - -
Bva07g01211 437 Pfam GRAS domain family 25 435 IPR005202 -
Bva07g01211 437 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 436 IPR005202 -
Bva07g01211 437 ProSiteProfiles GRAS family profile. 13 435 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01211 Bva-Chr7 13154425 13156286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01211 6 437 GRAS Transcription Factor Family AT1G50420 49.775 1.48e-147 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva07g01211 GRAS 1.2e-111 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01211 - - gmx:100779726 518.85