Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01201 ATGGAGAACCAGACTCGGGTTCTGTGCCCAGAGAACCAAGAGCTTGCAGTGTACATGTGGAACAAATGGAAGGAAATGGCAGAGAAACCAAAAGGGATATcagaaaacattgaaaagaCTCTGTCTAAAGCTTACCAGAATATCTGTAACTCTAAAACGCCAATACAAACCATGAAGGACTTATCTCAGGTCAAGGGAGTGGGGAAATGGATTTTGAGGCTCATGCAAGGGTTTTTCGGCCCCGGTTCAGGAGGATCTGAAGCAGAAGATTTGAGCAAAAAGGGGAGGACAACTAAAGGAAGCAAACGCTATGTACCTCAAAAGAATTCTGTGGCATATGCATTGTTGATTGCCCTTTACAGGGGAACTTCAAACGGGAATGAATTTATGCGTAAACAGGAACTTATTGATGCTGCAGAAGCTAGTGGGCTATCTCGAGCGCCAATTGTGccagaaaagggaaaaggaaagCCTACACAGTTTGGAAGTTCTCCAAGGGAATGGTATAGTGGATGGAGCTGCATGAAGACCCTGATAACGAAGGGATTAGTTGTAAAATCAAGTTGTCCAGCGAAGTACATGCTAACTCAAGAAGGTAAAGAGACAGCACGTGAATGTCTAAAAAGATCTGGAATGGCAAATCCAGAAGAGAACTCTGTTACTGTAGAAAGCCTTTCTGATGTGGAGAAGCGAAATACATCAGATATAGAATTCAGGGGTGATCATTTGGACATAGAAGTAACATCACCATTGGCtcagaaaaagaagcaaatggATGTTCCTCTTGATTCCCTTGAGAGGTTTACACGCATGGGCTACTCCAAGGAACAAGTTATTAGTGCTGTCTCTGAAGTTTCCAGAAGTTATCCAGATAAGGATGTTTCATTGCTCTGGCCATCAGTTTTATGTCATCTTCGAGAGGAGCAAGTCTATGGTTTACAGTTGGGAActcaaaatatgagaaataattGCCAGATGAGAAGTACTTGTACAGTTGCAAATGATTCAATAGATCTTACTGGAAATGAGAGCAGACCTGTGAATTTGTGTTGTGGTGCAGATATGCCAAATCATGATACTACAGCATTTTCCTTGAGAGCTTGCTCATCATCTGCCTATGCCGTACCAAAGTCAATCAAAGATGGACCTGAACTAAAGATGAGTGTTCTAAGTGTGCCACCATTGAGCTTGGGGGAGAGATTTGAGGATGCATATGAagtcattttaatattagatgATCGGGAGCAATTTGCCACTCAGGGatCACGGTCCAGGAGAATTATAGGGAATATCCGCAgtcaattcaaaattcaaatagagGTTAGGCGACTGCCTGTTGGAGATGGAATTTGGATAGCTCGCCATAAAACTCTTGACAGCGAATACGTACTGGATTTTattgttgaaagaaagaacattGATGATTTACGCTGTTCAATCAGGGATAACCGCTACAGAGATCAAAAATTAAGGCTTCTGAGATGTGGACTGAAGAAGCTGATCTATCTTGTGGAAGGTGACCCAAATTCTTCTGAAGCTGCTGAAAGCATAAAAACTGCTTGTTTTACAACAGAGATTCTGGAGGGATTTGATGTGCAGAGAACAAGTGGCTTATTTGATACACTAAAGAAGTATGGTTATCTTACCCAAGCAATTTCCCAATACTACAAATCAAGAGATTTGGATAAAGAAGTTACGCACTCCGAAATATGCCCTCCTTTTGGTGAATTTATCAAAAGGTGCCAGGACCTTGATAAAATGACTGTCAGTGATGTATTTGCTACCCAACTTATGCAGGTCCCACAGGTTACAGAGGAGATTGCCATGGCTGTGCTGGATTTGTACCCTACACTTCACTCTCTTGCCCATGCCTACTCTCTTCTTGAGGGTGATGTTTCTGCACAACAAGACATGCTTAGAAGACAGAGTAACACTGTGATCAATGCAGTGGCAAGTAGGAACATTTTCCAAtgtgaagaatttgaagttggTAGTGCTCGTGATCAGTTTTCAAACCAACTAGCTATGGATTTTGGTTCACCATATCAGTGGCTAGCAGAGCAGAGATGGGAAACCAATAGGGGCGCCAATCTGGTTCGTCTTCTTCGCGAGTGTGCTCACTGTGTGGCACGTAGCAGCATCAAGAATGCAGATGTTGGACTCGAATATATTTCTCAGCTGGCTTCTCCTGATGGTGATTTAGTGCAGAGAATGGCCACTTATTTCAGTGAAGCACTTGCTTACAGAATAGTCAAAATTTTGCCTGGTGTTTATAAAGCTCTCAATTCTTCAAAAACTTCATCAATCTCAGAAGAACCTTTTGTTCGGAAGTATTTCTTCGAGTTATGCCCTTTCTTGAAGATGGCTTACTTGGTCACCAACCAAGCCATTGTTGAAGCCATGGAAGGGGAAAGAATAGTTCATATTATAGATCTCCATTCTTCTGAACCTGCTCAGTGGATTGATCTTATACATACTTTGAAGAAACGTAGAGAAGGCCCACCACATCTGAAAATCACAGGCATTCATGAGAACAAACAGGTTTTAGATCAACTGAACTTTCAGTTGACAAGGGAAGCTGAAAAATTGGACTTCCCTTTACAGTTCTATCCTATTGTGAGCAAGCTTGAAGATCTTGATATGGAAAGCTTGCCCGTTAAGACAGGAGAAGCTCTTGCAATCAGTTCAGTCCTTCAGCTGCATTCTCTTCTGGCAACTGATGATGAAATGCTTGGCAGAAACTCGCCTGCACCATCAATGAATCTTAATAGAGCAGTTCACATGAACGAGATGACTTTCGCAGAGTGGCTTGAGCAGAAAAGTATGATCAATGCATTTCTGAGCCCTAATTCTTCATTATCACCTCTTTCTCTGGGTTCTTCACCTAAGATGGAAAGGTTTCTAAACGCTCTAAGGAAATTCCAACCAAAGATAATGGTGATTACTGAACAGGAATCAAATGTTAATGGGCCTAATTTAgtggagaggtttgagaaGGCATTGCAGTactatttttcactttttgagTGCTTGGAATCTTGTGTTCCAAGAACATCTTTAGAAAGACAGAAGCTTGAGAGCATGCTTCTTGGAGAGGAAATAAAGAACATTGTTGCATGTGAGGGGTTAGAAAGAAAGCAGAGGCACGAGAAGCTTGAGAGGTGGATTCCAAGGCTGGAAATGGCTGGGTTTGGAAGGGTACCTTTTACCTATCCTGCAAAGTATCAAGCAAAGAAGCTGTTGCAGAGCTATGGCCAAAACCACAAGTACAAAATtcaagaagaggaagattGTTTGCTTATCTGCTGGAATGATAGACCCCTTTTTTCTGTAACTGCTTGGAAGTTTAGGAGATA 3356 0.3969 MENQTRVLCPENQELAVYMWNKWKEMAEKPKGISENIEKTLSKAYQNICNSKTPIQTMKDLSQVKGVGKWILRLMQGFFGPGSGGSEAEDLSKKGRTTKGSKRYVPQKNSVAYALLIALYRGTSNGNEFMRKQELIDAAEASGLSRAPIVPEKGKGKPTQFGSSPREWYSGWSCMKTLITKGLVVKSSCPAKYMLTQEGKETARECLKRSGMANPEENSVTVESLSDVEKRNTSDIEFRGDHLDIEVTSPLAQKKKQMDVPLDSLERFTRMGYSKEQVISAVSEVSRSYPDKDVSLLWPSVLCHLREEQVYGLQLGTQNMRNNCQMRSTCTVANDSIDLTGNESRPVNLCCGADMPNHDTTAFSLRACSSSAYAVPKSIKDGPELKMSVLSVPPLSLGERFEDAYEVILILDDREQFATQGSRSRRIIGNIRSQFKIQIEVRRLPVGDGIWIARHKTLDSEYVLDFIVERKNIDDLRCSIRDNRYRDQKLRLLRCGLKKLIYLVEGDPNSSEAAESIKTACFTTEILEGFDVQRTSGLFDTLKKYGYLTQAISQYYKSRDLDKEVTHSEICPPFGEFIKRCQDLDKMTVSDVFATQLMQVPQVTEEIAMAVLDLYPTLHSLAHAYSLLEGDVSAQQDMLRRQSNTVINAVASRNIFQCEEFEVGSARDQFSNQLAMDFGSPYQWLAEQRWETNRGANLVRLLRECAHCVARSSIKNADVGLEYISQLASPDGDLVQRMATYFSEALAYRIVKILPGVYKALNSSKTSSISEEPFVRKYFFELCPFLKMAYLVTNQAIVEAMEGERIVHIIDLHSSEPAQWIDLIHTLKKRREGPPHLKITGIHENKQVLDQLNFQLTREAEKLDFPLQFYPIVSKLEDLDMESLPVKTGEALAISSVLQLHSLLATDDEMLGRNSPAPSMNLNRAVHMNEMTFAEWLEQKSMINAFLSPNSSLSPLSLGSSPKMERFLNALRKFQPKIMVITEQESNVNGPNLVERFEKALQYYFSLFECLESCVPRTSLERQKLESMLLGEEIKNIVACEGLERKQRHEKLERWIPRLEMAGFGRVPFTYPAKYQAKKLLQSYGQNHKYKIQEEEDCLLICWNDRPLFSVTAWKFRR 1118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01201 1118 Gene3D - 401 550 - -
Bva07g01201 1118 SMART ERCC4_2 408 508 IPR006166 GO:0003677|GO:0004518
Bva07g01201 1118 Gene3D - 96 218 IPR036388 -
Bva07g01201 1118 Pfam GRAS domain family 698 1115 IPR005202 -
Bva07g01201 1118 Gene3D - 587 660 IPR042530 -
Bva07g01201 1118 MobiDBLite consensus disorder prediction 83 102 - -
Bva07g01201 1118 Pfam ERCC4 domain 412 537 IPR006166 GO:0003677|GO:0004518
Bva07g01201 1118 PANTHER CLASS II CROSSOVER JUNCTION ENDONUCLEASE MUS81 9 657 IPR033309 GO:0000737|GO:0006302|GO:0008821
Bva07g01201 1118 SUPERFAMILY Restriction endonuclease-like 405 551 IPR011335 -
Bva07g01201 1118 ProSiteProfiles GRAS family profile. 689 1115 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01201 Bva-Chr7 13045743 13056212 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01201 680 1118 GRAS Transcription Factor Family AT1G50420 51.339 2.09e-150 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva07g01201 GRAS 2.5e-120 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01201 K08991 - gmx:100798497 912.524