Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01183 ATGGAAAAGAAGaacttttctgaatttttatctGAGTTGATAGTTTTAGCTGATGATGTTGCTTCATTGGCTAAGAAATcagaaattgaaagagatatttttaCTGAGTTCGCCATGTTGGTTGAGAAATTTGCTGCAATCTTCAATGATTTGAAAGACAAGAACACAGTCATGGACAAGCCAGCGGTTAGAAAAGCGTTGGAATCCCTTGAGAATGAGCTTAGGCGTGCTAAAGCTTTGACAAAAAACCCCAATTTGAAACAACCCATCAAACAGATTGTGGACGTAACACATGATCTGGGTCGATCATTAGGGATGCTGCTTGTTGCCAGCCTTGAAGTGTCCACAGATTTTCGAGAAAAGATTGGGGGATTGCAGAAACAGTTCATGAATGTGAGATTTGGTGAGAATATGAGTCTAAGTTCCTCAAGTCCAAGATCAGAGTTTTCCATTGATATCAGGGTTGAACGGGAAATAGAAGAGGTCCACGAGGAAAtaactaatattaatattgacgATTTTGTACTGAAACTCAAGAATGGTAATGATGAAGAATTTACAATTGCTCTTATGAGACTAAAAGAGTTCATTAGAGGTGAAAAAATGGACAATGGCTTGTTTAATGAGGAAGCACTTGTTACCATTCTTTTCAGTCGTCTGGTTTCAAGTAAGGCAGACAATAGGCTTGTAatcattcaattattaaaaagcaTTGCTTTGGGCAATGATGAAAAGAAGGAGAAGATGGCAGAGGTAGAGTTCCTATCAACAGTCGTGAAGTCTCTGTCACGGGATGTAGCAGAGAGGAGGGAAGCTGTGGGGCTGTTGCTGGACCTCTCTGACCTTCCTGCCGTTCGGCGGCGAATTGGAAGAATTCAGGGGTGTATTGTTATGTTAGTATCTATCCTTAACGGAGACGATCCTGTTGCTTCACGCGATGCAGCAAAGTTGTTGGACGCATTGTCTAGCAATACTCAAAATGCACTCCATATGGCAGAAGCTGGTTACTTTAAACCACTAGTGCAGTATCTGAAAGAAGGGTCTGACATGACTAAGATTCTTATGGCAACTGCACTTTCTAGGCTGGAGCTCACTGATAATTGCAAAGCTTCCCTCGGAGATGATGGGGCAATTGAGCCTCTtgttaaaatgtttaataCAGGGAAGCTTGAGTCCAAGTTATCTGCTCTAAATGCATTGCAAAATTTGTCCAGCTTGACAGAAAATGTACAAAGACTGGTCAAATCAGGCATTGtatcctttcttcttcaacttcttttcTCTGTAACTTCTGTACTCATGACTCTGCGCGAACCCGTGTCAGCCATTCTTGCAAGAATTGCTCAGTCAGAACCTGTTCTTGTTAAGCAGGATGTGGCTCAGCAGatgctttctcttttgaatCTTTCTAGCCCCGTGATTCAATGTAATCTTTTAGAATCTCTAAATAGCATTGCTGCGCATCCTAGCGCGTCCAaagtaagaagaaaaatgaaggaaagagGTGCACTTCagcttctttttccctttctgaTGGAAACTAATGTTAAAATTAGAAGCAAAGCCATGGACTTGCTGTACACTCTCTCTAAAGATATGACAGAAGAGTTGACTGAACAACTGGATGAAACTCATATTTTGAACTTTGTTAATATCATCTCGTCATCAACATCAGACTGTGAGAAAGCTAGTGCTATTGGGATACTGAGCAATCTCCCTATTAGTGATAAAAAAGTGACAGACCAACTCAAGAGAGCAAACTTGCTACCCATTTTGATCACCATTATGAATTCATGCACAGGAATTAATTCATCCACATCATGCAAGTTAGCAGAGAATATTGCCGGTGTCTTAATCCGGTTTACCAATCCTTCTGACAAGAAACTTCAACTTTATTCAGCAGAACATGGGGTGATTCCTTTGCTTGTAAAATTGCTCTCAAGTGGCTCACCAATTGCAAAATGCAGAGCTGCAACCTCGCTTGCTCAGTTATCACAGAACTCTCTGTCCATTAGGAAGTCTAGAAAATCACCGTGGCTGTGTTTTTCTCCATCTGCAAATTCCTACTGTGAAGTTCATGATGGCTATTGCTTTGTGAACAGAACATTTTGTCTGGTCAAAGCAGGTGCTATTTCTCCACTTGTTCAAATATTGGGAGACAGGGAAAGAGAAGCAGATGAAGCTGCTCTTAATGCGCTTTCAACTCTAGTGCAGGATGAAATTTGGGAAGGTGGTGCCAATTGCATAGCCAGATTTTCTGGCGTTCAGgctattataaaaattttagaagttgGGGATGTGAAGGTTCAAGAGAAAGCACTATGGATACTGGAGAGAATATTCATGGTTGAAGAACACAAAGTAAAATATGGAGAATCTGCTCAGGTGGTTCTTATTGACCTGGCCCAGAAGGGTGATTCAAGATTGAAGTCAACAGTTGCAAAAATATTAGCAGATCTGGAGCTTTTGCAAGCTCAATCTAGTTACTTTTG 2492 0.3832 MEKKNFSEFLSELIVLADDVASLAKKSEIERDIFTEFAMLVEKFAAIFNDLKDKNTVMDKPAVRKALESLENELRRAKALTKNPNLKQPIKQIVDVTHDLGRSLGMLLVASLEVSTDFREKIGGLQKQFMNVRFGENMSLSSSSPRSEFSIDIRVEREIEEVHEEITNINIDDFVLKLKNGNDEEFTIALMRLKEFIRGEKMDNGLFNEEALVTILFSRLVSSKADNRLVIIQLLKSIALGNDEKKEKMAEVEFLSTVVKSLSRDVAERREAVGLLLDLSDLPAVRRRIGRIQGCIVMLVSILNGDDPVASRDAAKLLDALSSNTQNALHMAEAGYFKPLVQYLKEGSDMTKILMATALSRLELTDNCKASLGDDGAIEPLVKMFNTGKLESKLSALNALQNLSSLTENVQRLVKSGIVSFLLQLLFSVTSVLMTLREPVSAILARIAQSEPVLVKQDVAQQMLSLLNLSSPVIQCNLLESLNSIAAHPSASKVRRKMKERGALQLLFPFLMETNVKIRSKAMDLLYTLSKDMTEELTEQLDETHILNFVNIISSSTSDCEKASAIGILSNLPISDKKVTDQLKRANLLPILITIMNSCTGINSSTSCKLAENIAGVLIRFTNPSDKKLQLYSAEHGVIPLLVKLLSSGSPIAKCRAATSLAQLSQNSLSIRKSRKSPWLCFSPSANSYCEVHDGYCFVNRTFCLVKAGAISPLVQILGDREREADEAALNALSTLVQDEIWEGGANCIARFSGVQAIIKILEVGDVKVQEKALWILERIFMVEEHKVKYGESAQVVLIDLAQKGDSRLKSTVAKILADLELLQAQSSYF 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01183 830 Coils Coil 60 83 - -
Bva07g01183 830 Gene3D - 688 826 IPR011989 -
Bva07g01183 830 SMART arm_5 576 623 IPR000225 GO:0005515
Bva07g01183 830 SMART arm_5 491 531 IPR000225 GO:0005515
Bva07g01183 830 SMART arm_5 365 405 IPR000225 GO:0005515
Bva07g01183 830 SMART arm_5 406 449 IPR000225 GO:0005515
Bva07g01183 830 SMART arm_5 744 782 IPR000225 GO:0005515
Bva07g01183 830 SMART arm_5 242 281 IPR000225 GO:0005515
Bva07g01183 830 SMART arm_5 626 666 IPR000225 GO:0005515
Bva07g01183 830 SMART arm_5 698 738 IPR000225 GO:0005515
Bva07g01183 830 SMART arm_5 324 364 IPR000225 GO:0005515
Bva07g01183 830 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 376 418 IPR000225 GO:0005515
Bva07g01183 830 SUPERFAMILY ARM repeat 166 488 IPR016024 -
Bva07g01183 830 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN-LIKE 2 830 - -
Bva07g01183 830 Gene3D - 368 541 IPR011989 -
Bva07g01183 830 SUPERFAMILY ARM repeat 372 781 IPR016024 -
Bva07g01183 830 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 2 830 - -
Bva07g01183 830 Gene3D - 542 677 IPR011989 -
Bva07g01183 830 Gene3D - 169 367 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01183 Bva-Chr7 12944876 12948630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01183 181 830 U-box Gene Family AT1G20780 28.592 5.06e-48 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01183 K08332 - gmx:100791453 1176.77