Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01173 ATGCCAGATGTTCAGTCCCTTGTCAATGATTTTCTAAATCAGCTTAAAAAAcgTAAAATTGAAGGGTCGCAGGCCACGGCAAAGCAGACAGGAGAATTGCTTCGTTCTTTTATTTCACAGCAGCGAGTGCCCCACACGAACCAAGCTGGAGCTCTTATTGATGCTGTAAGGACTCTGGGGGAGCAGCTTATTGCTGCAAATCCTGTTGAGTTAGCTGTGGGAAATATCGTGAGGCGTGTTTTGCACATTATAAGGGAGGAGGATCTTTCACTTGCAACAGCTGCTATAGCTGGTATGGGACTGTCAGCAGcaagtgatgatgaagatgatgtgGAGCGAGCTGATAATCCCGGTTTATCAGCTGTTGCAGTTGCAGCTGCTGCAAGGAGCACCTTGCGTCCACCATCATTGCAAACACTCCTAGAGGATGTGCCTGATTCAACTGCTATTCCTCGTACATCTTCCTCTGGTGGTGACTCTGAAGGAAAATCCAAATCTATTGACAAAGGTTCAAGAGGTCGTAAGTTGAAGCATGATGTCATTGAAGCAGTTAATGAACTCATTCAAGATATTGCCACATGCCATGAACTAATAGCTGAGCAAGCAGTTGAGCACATCCATCAAAATGAGGTAATATTAACTCTGGGCAGTTCAAGAACAGTACTGGAATTTCTTTGCGctgcaaaagagaaaaagagatcaTTTCGGGTCTTTGTTGCTGAGGGTGCCCCAAGATATCAGGGGCATCTTCTTGCAAAAGAATTGGTAGCAAGAGGCTTACAAACCACGGTAATCACAGATTCTGCAGTTTTTGCCATGATATCCCGAGTGAACATGgttATAGTTGGAGCTCATGCTGTCATGGCTAATGGTGGAGTTATTGCCCCTGTTGGGTTGAATATGGTTGCACTTGCAGCTCAGAGGCATGCTGTTCCTTTTGTTGTACTTGCTGGGAGTCATAAGTTGTGCCCTTTGTATCCTCACAATCCTGAGGTCTTGCTTAATGAGCTGAGATCCCCCTCTGAGCTGCTTGATTTTGGGGAGTTTTCAGACTGCATGGACTATGGAAGTGGCACTggttcttctcttcttcacgTTATTAATCCAACGTTTGATTATGTGCCACCAAAGCTTGTTAGTCTCTTTATTACTGACACAGGAGGGCATAATCCGTCATACATGTACCGGCTTATAGCTGATTATTACTCTGCTGATGATTTGGTGGTGAAAGGAAAACCTGTGACAGGGAGCTA 1253 0.4254 MPDVQSLVNDFLNQLKKRKIEGSQATAKQTGELLRSFISQQRVPHTNQAGALIDAVRTLGEQLIAANPVELAVGNIVRRVLHIIREEDLSLATAAIAGMGLSAASDDEDDVERADNPGLSAVAVAAAARSTLRPPSLQTLLEDVPDSTAIPRTSSSGGDSEGKSKSIDKGSRGRKLKHDVIEAVNELIQDIATCHELIAEQAVEHIHQNEVILTLGSSRTVLEFLCAAKEKKRSFRVFVAEGAPRYQGHLLAKELVARGLQTTVITDSAVFAMISRVNMVIVGAHAVMANGGVIAPVGLNMVALAAQRHAVPFVVLAGSHKLCPLYPHNPEVLLNELRSPSELLDFGEFSDCMDYGSGTGSSLLHVINPTFDYVPPKLVSLFITDTGGHNPSYMYRLIADYYSADDLVVKGKPVTGS 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01173 417 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 9 54 - -
Bva07g01173 417 Pfam Initiation factor 2 subunit family 19 391 IPR000649 GO:0044237
Bva07g01173 417 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 54 409 - -
Bva07g01173 417 PANTHER BNAA01G32370D PROTEIN 9 54 - -
Bva07g01173 417 MobiDBLite consensus disorder prediction 136 161 - -
Bva07g01173 417 MobiDBLite consensus disorder prediction 136 171 - -
Bva07g01173 417 Gene3D - 194 401 IPR042529 -
Bva07g01173 417 PANTHER BNAA01G32370D PROTEIN 54 409 - -
Bva07g01173 417 SUPERFAMILY NagB/RpiA/CoA transferase-like 5 406 IPR037171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01173 Bva-Chr7 12864909 12869397 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01173 1 409 Eukaryotic Initiation Factors Gene Family AT3G07300 82.725 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01173 K03754 - rcu:8270898 717.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01173 07 12864909 12869397 Bva07g01173 07 12864909 12869397 ECH