Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01152 ATGAGCATGCTAGGCCTCAGAGACTTGGTTCTCATAGCTCCAACCCCTTCTCTTCACCAGCACCAGCAGAGCCAACCCATTACGGCAGAGCACCATTCCAATCTTCCTATGCCTTCTTCAGCTGCTCTCAGTGTTGGTCTTGGCATTTTCCCTCTTCTAACTGCCACTCCCTGTGTTCCACAGAGTAATGAGGTTGAACAATGTGGGAACACCAGCAATCCCAATCAGTGGAACTTCAAGATTTGCCCAGAAGTGAATTCTGCGAGAAAAGGAATGGCCAATGCCGAAGGTGAGAGTAACAAACAGTTGGGCGACAACGAGGAAGATGGTGAATTAAGGGTGTGCCAGGATTGTGGGAACAGGGCAAAGAAAGATTGCAACTTTAGAAGATGCAGGACTTGTTGCAAGGGACGTGGGTATGATTGTAGTACTCACGTGAAGAGCACGTGGGTGACCGCTGCTCGGCGGAGGGAGCGGCAGATGATGGTGGTTCCAGGTGGTGGTGCTGCTGGTCCTGGGGGTGCTTCATCTGGGTCTCCTCCAGGTGCTAAGAGGCCAAGACCTTTTGGGTTATTACCAAATCCTGCAACAACTTCTCACAGTTCTACCTCTAATGCTACCACACCAAGAAGCTTGGATACTAGTTCTTGTCACCAAGATGCTAGCTTCAAGCAATCTTTACCTGGCCAAGTTAGAGCCCCTGCTGTGTTTAGGTGCCATAGAGTGTCTGCTATTGGCAACGGAGAAGATGAATTTGCCTACTTGGCCACGGTGCATATCAGCGGCCATGTCTTTAAAGGTTTTCTGTATGATTATGGTGCTGATGGGAAAATCTCACAACTGAACTTAGAAAGCAACGGCAATGGAAAGAACAAGGAAAGTTCTTCGCCAATTGGAATTCCAAACAATGCCTTCCCTGCTTCTGGTTGCTG 932 0.4893 MSMLGLRDLVLIAPTPSLHQHQQSQPITAEHHSNLPMPSSAALSVGLGIFPLLTATPCVPQSNEVEQCGNTSNPNQWNFKICPEVNSARKGMANAEGESNKQLGDNEEDGELRVCQDCGNRAKKDCNFRRCRTCCKGRGYDCSTHVKSTWVTAARRRERQMMVVPGGGAAGPGGASSGSPPGAKRPRPFGLLPNPATTSHSSTSNATTPRSLDTSSCHQDASFKQSLPGQVRAPAVFRCHRVSAIGNGEDEFAYLATVHISGHVFKGFLYDYGADGKISQLNLESNGNGKNKESSSPIGIPNNAFPASGC 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01152 310 MobiDBLite consensus disorder prediction 287 302 - -
Bva07g01152 310 PANTHER LRP1 CARBOXY-TERMINAL DOMAIN PROTEIN 2 310 - -
Bva07g01152 310 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 227 273 IPR006511 -
Bva07g01152 310 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 2 310 IPR007818 GO:0003700|GO:0006355
Bva07g01152 310 MobiDBLite consensus disorder prediction 194 219 - -
Bva07g01152 310 Pfam Domain of unknown function (DUF702) 114 275 - -
Bva07g01152 310 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 114 156 IPR006510 -
Bva07g01152 310 MobiDBLite consensus disorder prediction 287 310 - -
Bva07g01152 310 MobiDBLite consensus disorder prediction 164 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01152 Bva-Chr7 12758646 12760148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01152 1 304 C2H2 Transcription Factor Family AT5G12330 44.479 2.64e-61 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Bva07g01152 DUF702 2.7e-56 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01152 - - gmx:100777812 372.474