Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01132 ATGGAAGAAACTGGCGAGACTGGAGAGAAGCCAATTTTTAGAGATATTAGACGCTATTTCTGTGAATACTGTGGTATCTGCAGGTCCAAGAAGGCCCTAATAACATCCCACATCAATACTCACCACAAGGAGGAGGTGGAGAAAAAAGCAAGCGTCGATGGTGATTGTGAAGCAGAGGATATAAAATCTAACACTTGCAATGAATGTGGTGCTAATTTCAAAAAACCTGCTTACTTGATACAACACATGCAAAGCCATTCTCTTGAGAGGTCATATGTTTGTACACTTGATGATTGTCATAAAAGTTATCGAAGAAAGGACCACTTGACTCGTCACCTTCTACAGCATCAAGGGAAGACTTTTAAATGTCCAATTGAGGGTTGCAACCGTGACTTTGCTTTTCAAGGGAATATGACAAGGCATATCAAGGAATTTCATGACGAGAATTCCAACTCTGCTGGTATTGAAAGTCAGAAGCAGCATGTTTGTAAAGAAATTGGTTGTGGAAAGGTTTTCAAATTTGCATCAAAGCTACGAAAGCATGAAAATTCTCATGTTAAGCTGGAAACCACAGAGGCACTCTGTGTAGAACCGGGTTGTATGAAAGTTTTTACTAATGTCGAATGCCTCAGAGCCCATATTAAATCCTGCCATCAATATCTTATCTGTGAGGTTTGTGGGGTTAAGCAACTGAAGAAGAACATCAAGAGGCACCTCCGTATGCATGAAACTGATATTTCATCAGAGACGCTTGAATGCGAATACGAGGATTGCAGCCGGAAATTCTCAAGTAAATCTAATCTCGATAAGCACGTGAAGGCTGTGCACTTTGAAGAGAAACCTTTTGTGTGTAGCTATCCTGATTGTGGTATGAGATTCTCTTACAAACATGTTAGAGATAACCATGAAAAATCTGGGATACATGTTTATACTTTGGGGGATTTTGAACAAGGCGATGAAGCATTCAGGTCAAGGCCTAGGGGAGGCCTGAAGAGGAAGTGTCCAACGGTTGAAATGTTGATTAGGAAGAGGATTACTCCACCCACCGAGTCGGAGCATTGGTTATTCACACAAGACGCCGAGTA 1085 0.4129 MEETGETGEKPIFRDIRRYFCEYCGICRSKKALITSHINTHHKEEVEKKASVDGDCEAEDIKSNTCNECGANFKKPAYLIQHMQSHSLERSYVCTLDDCHKSYRRKDHLTRHLLQHQGKTFKCPIEGCNRDFAFQGNMTRHIKEFHDENSNSAGIESQKQHVCKEIGCGKVFKFASKLRKHENSHVKLETTEALCVEPGCMKVFTNVECLRAHIKSCHQYLICEVCGVKQLKKNIKRHLRMHETDISSETLECEYEDCSRKFSSKSNLDKHVKAVHFEEKPFVCSYPDCGMRFSYKHVRDNHEKSGIHVYTLGDFEQGDEAFRSRPRGGLKRKCPTVEMLIRKRITPPTESEHWLFTQDAE 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01132 361 Gene3D Classic Zinc Finger 148 220 - -
Bva07g01132 361 ProSiteProfiles Zinc finger C2H2 type domain profile. 19 46 IPR013087 -
Bva07g01132 361 ProSitePatterns Zinc finger C2H2 type domain signature. 253 276 IPR013087 -
Bva07g01132 361 ProSitePatterns Zinc finger C2H2 type domain signature. 195 218 IPR013087 -
Bva07g01132 361 ProSiteProfiles Zinc finger C2H2 type domain profile. 92 121 IPR013087 -
Bva07g01132 361 PANTHER ZINC FINGER PROTEIN 9 351 - -
Bva07g01132 361 Gene3D Classic Zinc Finger 10 91 - -
Bva07g01132 361 PANTHER - 9 351 - -
Bva07g01132 361 SUPERFAMILY beta-beta-alpha zinc fingers 119 147 IPR036236 -
Bva07g01132 361 ProSitePatterns Zinc finger C2H2 type domain signature. 163 185 IPR013087 -
Bva07g01132 361 Gene3D Classic Zinc Finger 251 279 - -
Bva07g01132 361 ProSitePatterns Zinc finger C2H2 type domain signature. 123 146 IPR013087 -
Bva07g01132 361 ProSiteProfiles Zinc finger C2H2 type domain profile. 161 190 IPR013087 -
Bva07g01132 361 Gene3D Classic Zinc Finger 119 147 - -
Bva07g01132 361 Gene3D Classic Zinc Finger 280 305 - -
Bva07g01132 361 SMART c2h2final6 282 308 IPR013087 -
Bva07g01132 361 SMART c2h2final6 193 218 IPR013087 -
Bva07g01132 361 SMART c2h2final6 19 41 IPR013087 -
Bva07g01132 361 SMART c2h2final6 161 185 IPR013087 -
Bva07g01132 361 SMART c2h2final6 221 242 IPR013087 -
Bva07g01132 361 SMART c2h2final6 121 146 IPR013087 -
Bva07g01132 361 SMART c2h2final6 64 86 IPR013087 -
Bva07g01132 361 SMART c2h2final6 251 276 IPR013087 -
Bva07g01132 361 SMART c2h2final6 92 116 IPR013087 -
Bva07g01132 361 Pfam Zinc finger, C2H2 type 92 116 IPR013087 -
Bva07g01132 361 Pfam Zinc finger, C2H2 type 252 276 IPR013087 -
Bva07g01132 361 Pfam Zinc finger, C2H2 type 65 86 IPR013087 -
Bva07g01132 361 Pfam Zinc finger, C2H2 type 121 146 IPR013087 -
Bva07g01132 361 Pfam Zinc finger, C2H2 type 161 185 IPR013087 -
Bva07g01132 361 Gene3D Classic Zinc Finger 92 118 - -
Bva07g01132 361 ProSitePatterns Zinc finger C2H2 type domain signature. 284 308 IPR013087 -
Bva07g01132 361 SUPERFAMILY beta-beta-alpha zinc fingers 233 290 IPR036236 -
Bva07g01132 361 ProSiteProfiles Zinc finger C2H2 type domain profile. 64 91 IPR013087 -
Bva07g01132 361 ProSiteProfiles Zinc finger C2H2 type domain profile. 282 308 IPR013087 -
Bva07g01132 361 ProSitePatterns Zinc finger C2H2 type domain signature. 66 86 IPR013087 -
Bva07g01132 361 ProSiteProfiles Zinc finger C2H2 type domain profile. 251 281 IPR013087 -
Bva07g01132 361 ProSitePatterns Zinc finger C2H2 type domain signature. 94 116 IPR013087 -
Bva07g01132 361 SUPERFAMILY beta-beta-alpha zinc fingers 63 116 IPR036236 -
Bva07g01132 361 ProSiteProfiles Zinc finger C2H2 type domain profile. 121 151 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01132 Bva-Chr7 12653190 12654836 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01132 88 311 C2H2 Transcription Factor Family AT1G72050 51.449 4.23e-93 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva07g01132 zf-C2H2 0.0013 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01132 K09191 - gmx:100801812 542.732