Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01091 atgtCCACTGCTCCTCCGCCCATCTCCCCCACCGGCGTCGGTCTAGGTTACGGCATCGCCATCGCCGTCAGCATCCTCGTCCTCATCTCTACCATCATGCTCGCCTCCTACGCTTGCGTCAGAATCAAAGCCAATGGCCGCCGCATTACCATTGCCCGCGGCGGCGCCGGTGAGGACACTGACAGTACTGAAGAAGGTAGAAGCCACCCCCATCAGCAGATTAGCGGCAACTACGGCGACCCCGTTTTGATGGTTTTGGGCCTGGAAAACCCCATGATCGAATCGTACCCGAAGATCGTGCTCGGCGATAGCCGGCGATTGCCGAAGCCCAATAACGGTCCCTGTGCTATTTGCTTGTCGGAGTACCTACCAAAAGATACGGTGCGGTGCATCCCAGATTGTAACCACTGCTTCCATGCGGAATGCGTGGATGAATGGCTCCGGTTGAGCGCCACGTGTCCGTTATGTCGGAACTCTCCGGCTCCGTCGACTACGCCTACGCCCGCTGCTACGCCTCTGTCGGAGTTAGTTCCCGTGGCATTTCACGCCAGGTG 554 0.5848 MSTAPPPISPTGVGLGYGIAIAVSILVLISTIMLASYACVRIKANGRRITIARGGAGEDTDSTEEGRSHPHQQISGNYGDPVLMVLGLENPMIESYPKIVLGDSRRLPKPNNGPCAICLSEYLPKDTVRCIPDCNHCFHAECVDEWLRLSATCPLCRNSPAPSTTPTPAATPLSELVPVAFHAR 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01091 184 CDD RING-H2_EL5_like 115 157 - -
Bva07g01091 184 PANTHER RING-H2 FINGER PROTEIN ATL69-RELATED 16 166 - -
Bva07g01091 184 SUPERFAMILY RING/U-box 114 164 - -
Bva07g01091 184 Pfam Ring finger domain 115 157 IPR001841 -
Bva07g01091 184 MobiDBLite consensus disorder prediction 53 74 - -
Bva07g01091 184 SMART ring_2 115 156 IPR001841 -
Bva07g01091 184 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 16 166 - -
Bva07g01091 184 ProSiteProfiles Zinc finger RING-type profile. 115 157 IPR001841 -
Bva07g01091 184 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 85 162 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01091 Bva-Chr7 12392094 12393016 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01091 7 184 C3H Transcription Factor Family AT5G07040 60.556 1.19e-67 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01091 - - tcc:108663824 251.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01091 07 12392094 12393016 Bva07g01091 07 12392094 12393016 ECH