Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01085 ATGGCAGATCCTTGTCCCTCTGAGGCCTCTAGCATATCTGCAGCCTCCGAAGGCAAGAATTTGAGCAAAGAAGAAGCTCAGAACCGCATGATGAGCTCGAAAGAGATCGAGAAAGCTCATGAATCTGAACCTGATCAGGCTTCTAAGTCAAACCCTCATGTTTTGCTGGATTTGATGAAGATTTCAAGCGATGATTCTGCACATGGGTCGAAGGTGGAGCATAATTTCTTGAACTCTGGGACTTTTGCTTCATCTTCTAGGGCAAACAATGAAGAGACCGATGAGAACACTCGTGAGAAGACATCGGAGCCGAGAGTTTTCTCTTGTAATTTCTGTAAGAGAGAGTTCTCTTCTTCCCAGGCTTTGGGAGGGCATCAAAATGCCCATAAGCAAGAGAGGGCACTGGCCAAAAGGCGTCAAGGTATTGATGTTGGCCCTTATGGGCATCCACATTTCCCTTATTACCCTTATCCAAGCCTGTCCACCCACTCTTTCTATGGATCGTACAATAGGGGACTAGGGGTAAGAATGGAATCAATGATTCACAAGCCTCCTTATGCTTGGACCTCGCCAGGCTATAGGTTTGGGCATGGTGCTGGGTGGTCAAGGCAAAATGGGTTCAACTCACCAACCGTTAATAGCCTCAGGATTGATGATTTGCAAGCACATGGTGGTGGAGGGTATGGACTTCTTGGCAGCTCTTCTAGTTCACGGCTAGAGGAAGGTGGCGGACCTGGCGGTACTCTTCGTCTCTTCGGTGAGTCTTCTTCAAGTGTTGTTGCTATCAATTCAAGCCCTGGCTTGAACAAACCAGCACCTTTAACTGCAAGTGGAGAAGAACCTTCCAAAAGCAATGATGCTCAACCTTCCGGGCTTGATTTGTCACTTAAGCTTTA 896 0.4732 MADPCPSEASSISAASEGKNLSKEEAQNRMMSSKEIEKAHESEPDQASKSNPHVLLDLMKISSDDSAHGSKVEHNFLNSGTFASSSRANNEETDENTREKTSEPRVFSCNFCKREFSSSQALGGHQNAHKQERALAKRRQGIDVGPYGHPHFPYYPYPSLSTHSFYGSYNRGLGVRMESMIHKPPYAWTSPGYRFGHGAGWSRQNGFNSPTVNSLRIDDLQAHGGGGYGLLGSSSSSRLEEGGGPGGTLRLFGESSSSVVAINSSPGLNKPAPLTASGEEPSKSNDAQPSGLDLSLKL 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01085 298 Pfam C2H2-type zinc finger 106 131 - -
Bva07g01085 298 PANTHER AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN, PUTATIVE-RELATED 3 298 - -
Bva07g01085 298 MobiDBLite consensus disorder prediction 262 298 - -
Bva07g01085 298 ProSiteProfiles Zinc finger C2H2 type domain profile. 107 134 IPR013087 -
Bva07g01085 298 Gene3D Classic Zinc Finger 83 143 - -
Bva07g01085 298 ProSitePatterns Zinc finger C2H2 type domain signature. 109 129 IPR013087 -
Bva07g01085 298 MobiDBLite consensus disorder prediction 72 90 - -
Bva07g01085 298 MobiDBLite consensus disorder prediction 1 102 - -
Bva07g01085 298 PANTHER ZINC FINGER PROTEIN JAGGED 3 298 IPR045320 GO:0003700
Bva07g01085 298 SUPERFAMILY beta-beta-alpha zinc fingers 104 134 IPR036236 -
Bva07g01085 298 MobiDBLite consensus disorder prediction 22 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01085 Bva-Chr7 12348847 12349743 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01085 54 215 C2H2 Transcription Factor Family AT5G10970 38.415 1.90e-22 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva07g01085 zf-C2H2_6 1.4e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01085 - - gmx:102663393 235.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01085 07 12348847 12349743 Bva07g01085 07 12348847 12349743 ECH