Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01061 ATGGAAAATGAGATTGACGATGGGGAGCCCCTCAAGGACCAGAATGGATCAGAGTTGAATGACGAGGGTAATGGAGGAAGTGCAGGTGGTGTTATTCTGAAGAAAGGGCCCTGGACATCTACTGAAGATGCTATTTTGGTGGACTATGTCAAGAAGCATGGGGAGGGGAACTGGAATGCTGTTCAGAAGTACTCAGGCTTGTCTCGATGTGGCAAAAGCTGTCGACTGCGGTGGGCAAATCACCTGAGGCCAAATTTAAAGAAAGGGGCATTTACTGCAGAAGAAGAGCGGTTGATTGCTGAACTCCATGCCAAGATGGGAAACAAATGGGCATGCATGGCCGCACATTTGCCTGGTCGTACAGACAATGAGATAAAGAACTACTGGAATACCCGGATCAAGAGGCGTCAACGGGCTGGCTTGCCACTTTATCCTCCTGAAGTGTGTTTGCAAGCATTGCAAGAGAGTCAGATTGGCCAAAGCACTGCACGAAAAAATGATAGGGATAGAGGAAATCATGGTTCCCTGCAGAAAAGTAGTAATGAGATACATGATGCTATATTTGATAGTTTAAAGGCTAATCAGGGACTTTTACCTTGCGTACCAGAGATTCCTAATATTTCTGCTGATAGCGTTTTGCTGAAAGGTCTTGGTTCTTCTCAGTATTGTAATTTTCTGCCATCAACATTGCCTCACCATAAGCGTCTACGAGAGTCAACAACGCCATTTCTTGGTTCCAATGTTATGAACAGAAATGGGTATTATCCACTTGACCATATTCGTGATAATGCCTCAAATAAGATTGCTCAATATTTTGGAATGCATGCTCATCTTGATCCTTGTCCCTCAAAAAATTCACTATCTTATGGCCATTCACTTTCAAATGGCAATTCCTCTACTTCTAAGCCAATTTCTGAGGCTGTGAAGATAGAGCTCCCTTCACTCCAATATCCTGAAACTGACCTAGGTAGCTGGGGCAGGTCTCCAACCCCACCTCCTTTAGTTGAGTCAGTTGATGTTTTCATTCAGTCTCCACGGAATAGTGCACTAGAGTCAGACTGTTCATCACCGCAGAATACTGGCCTCCTGGATGATATGCTCAATCAGGCAAAGATTATGAGCAGTTCAAAGAAACATTATTCTGAAAAGAGTTCAAATTCATCAACTGCAACTCCTGGCGATGGAGCTGACAGTGGCGCTTTTAACATGTTTGAGACAGAATGGGAAGACTACACTGAtcatatttcttcatttggtGCAACTTCAATGTTAAACGAGTGCCCTGCTATTAGTGCGACTGGAAATTCATTGGATGAACAACTACCAGCTCAAATCTTTAGTGGCAACATTGCAAAACTAGAATCTGCTGAGCATGCTTGGACCTCTAACAGTGAAAATCAAAGCATGTCAATGTTCAATATCAGCCGGCCAGATTTGTTGCTTGCTTCAGATTGGATTGAGCAGAATTCTAGGAATGGACAGAACCCAGCAATCAACAAAGATGCTATGGCTACCCTACTCGGCGATGATTTAGCGACAGATTACAAGCAAATGACTGCTGGAACTTCTGCATCAAGTCAAGTTTGGGGCCTCGGTTCATGTTCTTGGAATAACATGCCTGCAGTGTGTCAAATGGCTGATCTTCTTTATAAAGACAGCCTTAAGATGTATGACTG 1676 0.4326 MENEIDDGEPLKDQNGSELNDEGNGGSAGGVILKKGPWTSTEDAILVDYVKKHGEGNWNAVQKYSGLSRCGKSCRLRWANHLRPNLKKGAFTAEEERLIAELHAKMGNKWACMAAHLPGRTDNEIKNYWNTRIKRRQRAGLPLYPPEVCLQALQESQIGQSTARKNDRDRGNHGSLQKSSNEIHDAIFDSLKANQGLLPCVPEIPNISADSVLLKGLGSSQYCNFLPSTLPHHKRLRESTTPFLGSNVMNRNGYYPLDHIRDNASNKIAQYFGMHAHLDPCPSKNSLSYGHSLSNGNSSTSKPISEAVKIELPSLQYPETDLGSWGRSPTPPPLVESVDVFIQSPRNSALESDCSSPQNTGLLDDMLNQAKIMSSSKKHYSEKSSNSSTATPGDGADSGAFNMFETEWEDYTDHISSFGATSMLNECPAISATGNSLDEQLPAQIFSGNIAKLESAEHAWTSNSENQSMSMFNISRPDLLLASDWIEQNSRNGQNPAINKDAMATLLGDDLATDYKQMTAGTSASSQVWGLGSCSWNNMPAVCQMADLLYKDSLKMYD 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01061 558 MobiDBLite consensus disorder prediction 159 179 - -
Bva07g01061 558 MobiDBLite consensus disorder prediction 1 35 - -
Bva07g01061 558 MobiDBLite consensus disorder prediction 374 395 - -
Bva07g01061 558 PANTHER TRANSCRIPTION FACTOR, PUTATIVE-RELATED 2 546 - -
Bva07g01061 558 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 83 137 IPR017930 -
Bva07g01061 558 SUPERFAMILY Homeodomain-like 34 129 IPR009057 -
Bva07g01061 558 Pfam Myb-like DNA-binding domain 35 82 IPR001005 -
Bva07g01061 558 Pfam Myb-like DNA-binding domain 88 131 IPR001005 -
Bva07g01061 558 MobiDBLite consensus disorder prediction 374 398 - -
Bva07g01061 558 ProSiteProfiles Myb-like domain profile. 33 82 IPR001005 -
Bva07g01061 558 Gene3D - 34 87 - -
Bva07g01061 558 Gene3D - 90 136 - -
Bva07g01061 558 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 30 82 IPR017930 -
Bva07g01061 558 SMART sant 87 135 IPR001005 -
Bva07g01061 558 SMART sant 34 84 IPR001005 -
Bva07g01061 558 ProSiteProfiles Myb-like domain profile. 83 133 IPR001005 -
Bva07g01061 558 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 2 546 - -
Bva07g01061 558 CDD SANT 37 82 IPR001005 -
Bva07g01061 558 CDD SANT 90 131 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01061 Bva-Chr7 12181423 12185952 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01061 10 548 MYB Transcription Factor Family AT5G06100 42.419 1.07e-127 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva07g01061 Myb_DNA-binding 6.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01061 K09422 - gmx:100810415 691.419