Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01040 ATGGAGTCGCTACCACCTCCACCGCCCACTATTCCAGCAAATGTTGTTCCAGTTAAGGTGGACTTGAGAAAAAGCACTGAGCCAGTCAAGAAAACTTCAGACAAAAAACTTGTACCCATGGCAAGGCGCGGTATGGGATCAAAGGGCGAAAAGATTACACTGTATGCTAACCATTTTAGAGTTGGCCTGAGGAAGAAAGAAGGCTACTTCTATCATTATAGTGTTGCCCTATTTTATGAAGATGGGAATCCTGTTGAAGCTAAAGGCATTGGAAGAAGGGTTATAGACAAAGTATATGAGACATATGAATCAGAATTAGAAAGGAAGGTCTTTGCATATGATGGAGAGAAGAGCTTATTTACTACTACTTGTCTCACACGTAACAAGTTTGAATTCACTGTTGTGTTAGAGGAGCTATCATCAAACagGGTTAGGAAGAATAGAAGCCCTGACAGTCCTGATGAAAGTGATAAAAAGCGAATGAAGCGTTCAGCTCAAACCAAAACAATTAGAGTTGAAATCAACTTTGCGGCTAAAATCCCAATGCAAGCAATTGTAGATGCATTACATGGTCAAGAGTCAGAGCATTCTCAAAAAGCATTGAGGGTTCTCGATATCATTCTTAGGCAAAATGCAGCAAAGCAAGGTTGTGTACTTGTCTGTCAATCTTTCTTCCATGATAACCCAAGGAATTACACAGATATAGGAGGTGGTGTGCAAGGCTGCCAAGGTTTCCATTCAAGTTTCCGAGCCACTCAAGGGGGATTGTCCCTTAATGTTGATGTTTCAACGACATTGCTTTTGAAGCCTGGTCCAATAATGGACTTCCTTtgccaaaatcaaaatgttcACGCTCGCTCAATTGATTGGACCAAGGCCAAACGGATGTTGAAAAACCTGAGGATTAAAGCCAATAATATTGAGTACAAAATCACTGGGTTGAGTGATAGAATCTGCAAAGAGCAAACTTTCCCACTTAAACAAGGAAGAACTGGAGATGGTGAGGTGCAGTCGGTTGAAATAACTGTTTTTGACTATTTTCTCAAGCATAAACAAATTCGGTTGCGCTATTCAGCTGATTTCCCTTGTATCAACGTTGGCAAGCCAAAGCGCCCATCATACTTTCCAATTGAGCTCTGCACTCTTGTTCCTCTCCAAAGGTATACAAAGGCATTGACCAATCTGCAAAGGGCTCAGCTAGTGGAGAAGTCAAGGCAAAAGCCTCGTGAACGGATGAATGCTTTGGCTGATTCACTAAGAAGTAGCAGATATGGTGATGACCCTATGCTTCAGTCTTCTGGAATTTCCGTTGACAGTGAGTTTACTAAAGTGACAGACCGTGTACTAAAAGCTCCAAAACTTAAAGTTGGAAATGGTCAGGAATTCTCTCCTCAAAATGGACGCTGGAACTTCAACTATAAgAAACTGGTTGAACCTGTGGAAATTAAGCTTTGGTCAATTGTGAACTTCTCTGATCGTTGTGATGTACATGGCTTGAAAATGGGCCTGAAGAGATGTGCAGAGATGAAAGGGATTTGTCTGAATCCTCCATATACATTCGAAGAGAATCCTCATTTCAAGCGTGAGCCAGCTCATGATCGTGTGAAGAAAATGTATGAAACTTTACAGTCCACGCTGCCACAGCCCCCCCAGTTTCTATTATGCATTCTTCCAGAGAAAAAAAACTGTGACCTTTATGGTCCGTGGAAGAAAATTAGTCTTTCTGATAAAGGGATCCCCACACAGTGCATTGCTGCAACAACAAAATTGAATGACCAGTGTCTTACTAATATCCTTTTGAAAGTTAATGCCAAGCTTGGTGGGATAAATTCCTTTTTGTCCAAAGAGCATCCACCTTCTCATTCTATCCCCTTTGTTTCTAAGGTCCCCACCTTGATTCTGGGCATGGATGTTTCACATGGCTCCCCCGGCCGGTCTGATGTGCCGTCAATAGCAGCGGTAGTTAGCTCTCGAAATTGGCCATTGATTTCGCGTTATAGAGCTGCAGTTCGCACTCAGTCACCAAAAGCTGAGATGATTGGCAATTTATTCAAGCCTGTTTCTGATAGTACTGTGGATAATGGCATTTTCAAGGAATTGCTACTTGACTTCTATGAAACTTCACAGCATAGGAAGCCTGAACATATAATCATTTTCAGGGATGGTGTGAGTGAGTCCCAGTTTAACCAAATTTTAAACCttgaattaaatcaaattattgagGCATGCAAGTTTTGTGATGAAAGGTGGTCACCAAAGTTCACTGTAATTGTTGCGCAAAAGAATCATCATACTAGATTCTTCCAAACTGATTCTCCAAGCAATGTGCCAGCTGGAACTGTTATAGACAACAAAATCTGTCATCCAAGGAACAATGATTTTTACATGTGTGCTCATGCTGGGATGATTGGGACAACTCGGCCTACCCATTACAATGTTTTACATAATGAGATTGGATTCTCTGCTGATGATTTACAAGATCTTGTACACTCTCTATGTTATGTGTATCAGAGGAGCACAACTGCTGTATCAGtagTTGCCCCCATTTGCTATGCTCACTTGGCAGCAGCCCAGATGGCACAATTTATGAAATTCGACGGCCTGTCTGAGAGTTCTGCCAGCCATGGTGTAGTAACAGCTGCCGGTGAAGTTGCAGTGCCGGACTTACCTCGTCTTCATGACGGAGTCACCAACTCCATGTTCTTCTGCTA 2711 0.4157 MESLPPPPPTIPANVVPVKVDLRKSTEPVKKTSDKKLVPMARRGMGSKGEKITLYANHFRVGLRKKEGYFYHYSVALFYEDGNPVEAKGIGRRVIDKVYETYESELERKVFAYDGEKSLFTTTCLTRNKFEFTVVLEELSSNRVRKNRSPDSPDESDKKRMKRSAQTKTIRVEINFAAKIPMQAIVDALHGQESEHSQKALRVLDIILRQNAAKQGCVLVCQSFFHDNPRNYTDIGGGVQGCQGFHSSFRATQGGLSLNVDVSTTLLLKPGPIMDFLCQNQNVHARSIDWTKAKRMLKNLRIKANNIEYKITGLSDRICKEQTFPLKQGRTGDGEVQSVEITVFDYFLKHKQIRLRYSADFPCINVGKPKRPSYFPIELCTLVPLQRYTKALTNLQRAQLVEKSRQKPRERMNALADSLRSSRYGDDPMLQSSGISVDSEFTKVTDRVLKAPKLKVGNGQEFSPQNGRWNFNYKKLVEPVEIKLWSIVNFSDRCDVHGLKMGLKRCAEMKGICLNPPYTFEENPHFKREPAHDRVKKMYETLQSTLPQPPQFLLCILPEKKNCDLYGPWKKISLSDKGIPTQCIAATTKLNDQCLTNILLKVNAKLGGINSFLSKEHPPSHSIPFVSKVPTLILGMDVSHGSPGRSDVPSIAAVVSSRNWPLISRYRAAVRTQSPKAEMIGNLFKPVSDSTVDNGIFKELLLDFYETSQHRKPEHIIIFRDGVSESQFNQILNLELNQIIEACKFCDERWSPKFTVIVAQKNHHTRFFQTDSPSNVPAGTVIDNKICHPRNNDFYMCAHAGMIGTTRPTHYNVLHNEIGFSADDLQDLVHSLCYVYQRSTTAVSVVAPICYAHLAAAQMAQFMKFDGLSESSASHGVVTAAGEVAVPDLPRLHDGVTNSMFFC 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01040 903 Pfam PAZ domain 274 400 IPR003100 GO:0005515
Bva07g01040 903 Gene3D - 448 615 - -
Bva07g01040 903 ProSiteProfiles Piwi domain profile. 552 864 IPR003165 GO:0003676
Bva07g01040 903 Pfam Argonaute linker 2 domain 410 455 IPR032472 -
Bva07g01040 903 MobiDBLite consensus disorder prediction 143 166 - -
Bva07g01040 903 Gene3D - 622 903 IPR036397 GO:0003676
Bva07g01040 903 CDD PAZ_argonaute_like 270 383 - -
Bva07g01040 903 SMART DUF1785_2 218 270 IPR014811 -
Bva07g01040 903 Pfam Piwi domain 553 864 IPR003165 GO:0003676
Bva07g01040 903 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 2 902 - -
Bva07g01040 903 SUPERFAMILY Ribonuclease H-like 537 862 IPR012337 -
Bva07g01040 903 SUPERFAMILY PAZ domain 265 423 IPR036085 GO:0005515
Bva07g01040 903 Gene3D paz domain 264 388 - -
Bva07g01040 903 SMART PAZ_2_a_3 271 406 IPR003100 GO:0005515
Bva07g01040 903 Pfam Argonaute linker 1 domain 222 266 IPR014811 -
Bva07g01040 903 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 2 902 - -
Bva07g01040 903 Pfam N-terminal domain of argonaute 51 208 IPR032474 -
Bva07g01040 903 SMART Piwi_a_2 552 864 IPR003165 GO:0003676
Bva07g01040 903 ProSiteProfiles PAZ domain profile. 309 384 IPR003100 GO:0005515
Bva07g01040 903 CDD Piwi_ago-like 428 858 IPR045246 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01040 Bva-Chr7 12043560 12049494 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01040 24 903 Eukaryotic Initiation Factors Gene Family AT1G48410 33.584 9.97e-157 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01040 K11593 - pop:7486850 1258.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01040 07 12043560 12049494 Bva07g01040 07 12043560 12049494 ECH