Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01037 ATGGCGGAGGTCATGAACATGCCTTCGGATTCTCTCGACAAATCCCCCTCCGCTTCtgctcctcctcctcctgCGGCGCCAGTTGCTGATGAGGATCTCCCTCCGCCGCCTCCATCATCGCAACCTCCGCTGCATTCTTCTTCCCGGAGAAGGGATAGGGATTCAAGGGATAGAAGAGATGATAGGGATTTTGATCGCCTTCCGAACCGACGTGGGGGTGATTACTATGACCGGAACATGTCACCTCCGCCGCCtctgagagagagagatagggaCTACAAGCGCCGTCGCAGCCCCAGCCCTTCCTATCGTGACCGGAGGTATTCCCCTCCGCGGCGCTCTCCCCAACCGTTTAAGCGATCCAGGAGGGGGAGCCCCCGAGGTTCTTATGGACCTGATGACAGGTTTGGCTATGATTATTTTGGCGGCTATGATAGGGGAGTTGGAAGACCTGGTTACACAGATGAGAAGTATGGCAGATTTGTGCATCGATCTGCTGGAGGCTATCAAAATGGGGTTTCTGACCTGGAATCAAATCGTGGTTATGCAGACTTGCCAGGTGGTGGTACTCAAAGAGAGGGATTGATGTCCTATAAGCAATTCATTCAGGAGCTTGAGGATGATATATTACCTGCTGAAGCTGAGCGTAGGTATCAGGAGTACAAATCAGAGTACATTACTACCCAGAAACGGGCTTATTTTAATGCTCACAAGGATGAAGAAtgGTTGAGAGATAAATATCATCCAACAAATTTGGTTTCAGTCAACGAGAGGAGGAATGAAAATGCTAGGCGGCTAGCAAAAGATTTTCTGCTTGATTTGCAGAGTGGGACATTAGACCTAAATCCTGGTTTAAACACCTCTTCGTCCGGCAAATCAGGGCAAGTTAGTGAACCAAAttcagaagaagaagcagatgCTGTTGGTAAACGAAGAAGACATGGAAGGGGacctaataaagaaaatgatttctcAGCTGCTCCAAAAGCTCACCCTATCAGTTCTGAACCTAGACGAATACAAGCAGATATTGAACAGGCTCATGCCCTTTTACGCAAACTTGACTCAGAAAAGGGTGTTGAAGATAATGTTTTATCCAGTAGTGATCTCAACAAAAACGATGATAAGACCCATAGTGGATCTGTGGGGCCTATAATAATTATACGAGGCTTGACATCTGTCAAAGGCTTAGAAGGGGTTGAGCTTCTTGACACACTCATTACATATCTTTGGCGGATACATGGTGTAGATTATTATGGCATGATTGAGACTAGCGAGGCTAAGGGTTTTAGACATGTGAGACCAGAAGGAACAGGACATGAAGAAACAAGTAAACTTGGGTCTGATTGGGAAAAGAAACTTGACTCATTTTGGCAGGGAAGGTTGAATGGTCAGGATCCCTTGGAAGTAATGACTGCTAAGGACAAGATAGATGCTGCAGCAGTTGAAGTGTTGGATCCATATGTCAGAAAAATTAGGGATGAGAAGTATGGATGGAAGTACGGTTGTGGAGCCAAGGGCTGCACAAAACTTTTCCATGCAGCTGAATTTGTGCACAAACATCTCAAACTAAAACACCCAGACCTTGTAGTGGAACTAACTTCAAAAGTGCGTGAGGATCTCTATTTCCAAAACTACATGAATGATCCAGATGCTCCTGGTGGAACACCTGTCATGCAGCAGCCCCAGAAGGACAGACCTCTTAAGCGGAGATCAGGTCTGGAAGGTAGATTGAGAGATGACCGAGGCAATCGGCGAGACCATGAACGGGTTGACAGAGTAACTGATGGAGATAGGAGTGAGAACTCACCATCTCATGAAAGGATGGGAAATCATGATGAAGCTATGTATGATTATGCTGGGCCTGGTGTTCCTCCATTTACCTCAGATATGCCCCCACCTCCACCGGTGTTGATGCCTGTACCAGGAGCTGGGCCTTTGGGTCCCTTTGTTCCTGCTCCACCAGAAGTTGCAATGCAGATGTTAAGAGAGCAAGGGGGGCCATCTTCATATGATGCTCCTGGAAGGAAGATGCGGTCTGGCCCTCATATGGGTGGACCAGCACCGATAATTGCTGTTCCCCCAGCTTTTAGACCAGATCCTCGGCGAATGCGAAGTTATCAAGATCTAGATGCACCCGAAGACGAAGTCACTGTGATAGACTATCGGAGTTTGTA 2177 0.4571 MAEVMNMPSDSLDKSPSASAPPPPAAPVADEDLPPPPPSSQPPLHSSSRRRDRDSRDRRDDRDFDRLPNRRGGDYYDRNMSPPPPLRERDRDYKRRRSPSPSYRDRRYSPPRRSPQPFKRSRRGSPRGSYGPDDRFGYDYFGGYDRGVGRPGYTDEKYGRFVHRSAGGYQNGVSDLESNRGYADLPGGGTQREGLMSYKQFIQELEDDILPAEAERRYQEYKSEYITTQKRAYFNAHKDEEWLRDKYHPTNLVSVNERRNENARRLAKDFLLDLQSGTLDLNPGLNTSSSGKSGQVSEPNSEEEADAVGKRRRHGRGPNKENDFSAAPKAHPISSEPRRIQADIEQAHALLRKLDSEKGVEDNVLSSSDLNKNDDKTHSGSVGPIIIIRGLTSVKGLEGVELLDTLITYLWRIHGVDYYGMIETSEAKGFRHVRPEGTGHEETSKLGSDWEKKLDSFWQGRLNGQDPLEVMTAKDKIDAAAVEVLDPYVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPDLVVELTSKVREDLYFQNYMNDPDAPGGTPVMQQPQKDRPLKRRSGLEGRLRDDRGNRRDHERVDRVTDGDRSENSPSHERMGNHDEAMYDYAGPGVPPFTSDMPPPPPVLMPVPGAGPLGPFVPAPPEVAMQMLREQGGPSSYDAPGRKMRSGPHMGGPAPIIAVPPAFRPDPRRMRSYQDLDAPEDEVTVIDYRSL 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01037 725 PANTHER SERRATE RNA EFFECTOR MOLECULE-LIKE PROTEIN 1 725 - -
Bva07g01037 725 Pfam SERRATE/Ars2, N-terminal domain 199 280 IPR021933 -
Bva07g01037 725 MobiDBLite consensus disorder prediction 303 320 - -
Bva07g01037 725 MobiDBLite consensus disorder prediction 1 138 - -
Bva07g01037 725 MobiDBLite consensus disorder prediction 46 73 - -
Bva07g01037 725 MobiDBLite consensus disorder prediction 545 630 - -
Bva07g01037 725 MobiDBLite consensus disorder prediction 564 614 - -
Bva07g01037 725 MobiDBLite consensus disorder prediction 83 112 - -
Bva07g01037 725 Pfam Arsenite-resistance protein 2 443 579 IPR007042 -
Bva07g01037 725 MobiDBLite consensus disorder prediction 279 337 - -
Bva07g01037 725 MobiDBLite consensus disorder prediction 279 300 - -
Bva07g01037 725 ProSitePatterns Zinc finger C2H2 type domain signature. 503 526 IPR013087 -
Bva07g01037 725 MobiDBLite consensus disorder prediction 17 43 - -
Bva07g01037 725 PANTHER ARSENITE-RESISTANCE PROTEIN 2 1 725 IPR039727 GO:0006397
Bva07g01037 725 MobiDBLite consensus disorder prediction 665 710 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01037 Bva-Chr7 12022854 12030948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01037 68 725 C2H2 Transcription Factor Family AT2G27100 63.570 0.0 747
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01037 - - gmx:100817569 1039.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01037 07 12022854 12030948 Bva09g01523 09 8841889 8848814 ECH
Bva07g01037 07 12022854 12030948 Bva07g01037 07 12022854 12030948 ECH