Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01035 ATGAAGAAAACTCCTCCTTTTCCTCCTCTTCCTACTTCTTCttgttattcttcttcttcttcttcctcgtCATCATCATCGACAACTTCCTCTGTTGTTGAAAATCTTCATCAACCAATCCAAACAGGGCCTAAACATGTGAGAAGGAATCTGAATCCTGAGAAATCTGTGAACAATGGAGCTCAAGATAATGACTCAAGCTCCGGCACAAGAAGCTCCATTTACAGAGGAGTTACCagACATAGATGGACAGGGAGATATGAAGCTCATCTCTGGGACAGAACCTGCTGGAACAAAATTTCAAccaagaaaggaaaacaaggTAATTTTCTTGGTGCATATGATAATGAAGAGGTTGCAGCTCGCACCTATGATCTTGCTGCTCTCAAGTACTGGGGCCTGGACACAAACTTGAATTTCCCTAAGGAAACGTATACCAAGGAACTTGAGGAAATGGAGAAGGTTTCAAAAGAGGAATACTTAGCTTATTTGAGGAGACAAAGCAATGGATTTGCTCGAGGGGCCTCCAAGTATCGCGGCGTGGCTAGGCATCATCATAACGGTCGATGGGAGGCGAGGATCGGAAGAGTCTATGGGAGCAAGTATGTCTACTTGGGTACTTTCAgTACTCAAGAAGAGGCTGCTGCAGCATATGACATAGCAGCTATACAGTACAAAGGGGTAAATGCAGTGACCAATTTTGACATTAGCAACTACATTGATATATTAATGGAGAAAAACTTGGAACCACCACTAGGAAAACAAGCCcagaaaaccaaaaagtttTCCAGAacaaagaagaggaaaatggACCAAAACCAAACCCAGGAAATACAAACAGTTTCCATAACTAGGAATTCAATCAACCACACAGAGAAAACAGAGACCCAGAATGCACAAACAGTTCCATACATTTCCTCCTCTGAATCAGAAGTAGAAAAACCAGAACTTGAATTTCAATTCCAGTCACCCGAAACAGAGTCTACCCAGATTCCTCTCTCTCTGGAATCTTCATCAATGTTTGTGATGGAGCAAGAGCTTGAATGGAGCTTTCCAGATTCTGAGTTCTCTCAAATTCAAGTCCCGGAGCTACCCCTAGCAAGAACAGATTCTTTTCTGAGCTTACTAGATGATGCAGGGTTTGAGGAGGACATTGATTTTCTATTCCAAGGAGAAGAAAACGGTTTCGGTTTGGACgcaatcttaaaaaattcaagctttGGAGAAACTTCTGGTGCAGCAGCAAGCATGGTGGATAATGGGCAGGAAAAATCGTCctgtgtttcttcttcttctgctgctgctgctgcttcttcACCTTCTTCAACAACTTCAATCTCTTGTAACTATCCTATGTG 1358 0.3814 MKKTPPFPPLPTSSCYSSSSSSSSSSSTTSSVVENLHQPIQTGPKHVRRNLNPEKSVNNGAQDNDSSSGTRSSIYRGVTRHRWTGRYEAHLWDRTCWNKISTKKGKQGNFLGAYDNEEVAARTYDLAALKYWGLDTNLNFPKETYTKELEEMEKVSKEEYLAYLRRQSNGFARGASKYRGVARHHHNGRWEARIGRVYGSKYVYLGTFSTQEEAAAAYDIAAIQYKGVNAVTNFDISNYIDILMEKNLEPPLGKQAQKTKKFSRTKKRKMDQNQTQEIQTVSITRNSINHTEKTETQNAQTVPYISSSESEVEKPELEFQFQSPETESTQIPLSLESSSMFVMEQELEWSFPDSEFSQIQVPELPLARTDSFLSLLDDAGFEEDIDFLFQGEENGFGLDAILKNSSFGETSGAAASMVDNGQEKSSCVSSSSAAAAASSPSSTTSISCNYPM 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01035 452 PRINTS Ethylene responsive element binding protein signature 75 86 IPR001471 GO:0003700|GO:0006355
Bva07g01035 452 PRINTS Ethylene responsive element binding protein signature 217 237 IPR001471 GO:0003700|GO:0006355
Bva07g01035 452 Pfam AP2 domain 176 227 IPR001471 GO:0003700|GO:0006355
Bva07g01035 452 Pfam AP2 domain 74 133 IPR001471 GO:0003700|GO:0006355
Bva07g01035 452 CDD AP2 73 141 IPR001471 GO:0003700|GO:0006355
Bva07g01035 452 ProSiteProfiles AP2/ERF domain profile. 74 141 IPR001471 GO:0003700|GO:0006355
Bva07g01035 452 MobiDBLite consensus disorder prediction 432 452 - -
Bva07g01035 452 Gene3D AP2/ERF domain 74 142 IPR036955 GO:0003700|GO:0006355
Bva07g01035 452 Gene3D AP2/ERF domain 176 237 IPR036955 GO:0003700|GO:0006355
Bva07g01035 452 SMART rav1_2 177 241 IPR001471 GO:0003700|GO:0006355
Bva07g01035 452 SMART rav1_2 74 147 IPR001471 GO:0003700|GO:0006355
Bva07g01035 452 MobiDBLite consensus disorder prediction 1 73 - -
Bva07g01035 452 SUPERFAMILY DNA-binding domain 73 142 IPR016177 GO:0003677
Bva07g01035 452 MobiDBLite consensus disorder prediction 53 73 - -
Bva07g01035 452 MobiDBLite consensus disorder prediction 253 275 - -
Bva07g01035 452 MobiDBLite consensus disorder prediction 13 38 - -
Bva07g01035 452 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR WRI1 17 391 - -
Bva07g01035 452 CDD AP2 176 237 IPR001471 GO:0003700|GO:0006355
Bva07g01035 452 ProSiteProfiles AP2/ERF domain profile. 177 235 IPR001471 GO:0003700|GO:0006355
Bva07g01035 452 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 17 391 - -
Bva07g01035 452 SUPERFAMILY DNA-binding domain 176 237 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01035 Bva-Chr7 12010965 12014927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01035 62 286 AP2-EREBP Transcription Factor Family AT5G57390 55.507 8.36e-82 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Bva07g01035 AP2 2.2e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01035 - - gmx:100789774 369.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01035 07 12010965 12014927 Bva09g01525 09 8857959 8862737 ECH
Bva07g01035 07 12010965 12014927 Bva07g01035 07 12010965 12014927 ECH