LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva07g01030	ATGTTGGAATTACCATTCAACACGTCGTTTAGATTCTTCAAAATGGATTTGAGGTTACCATTTGCTGAGCAGCTGCAGCCTGAGTTGGTAGGTACTGCTGTTGCTCTTGTTGCTGTTGGCATCACTGCTGCTTATATCTACTTCTGCAAAAAACCCAGAGGTTGCTTagacccaaaaaaatttaaagagttCCAGCTTTTGAAGAAAACTCAGTTGAGCCACAACTCTGCAAGATTTAGATTTGCACTTCCAACATCTACCTCAGTGTTGGGTCTTCCTGTTGGAAAGAACATCCTCTGCAGGGGAAAAGATGGCAAAGGAGAACAAGTTGAGAGATCATACACACCAATCACTTTAGATTCTGAACTTGGTTACTTTGAGTTGGTTGTCAAGATGTACCCACAGGGAAGGATGTCCCATCATTTTAGACAAATGAAAGAAGGGGATTACTTGGCTGTCAAGGGACCTAAGGGGCGTTTCAGCTACAAGCCTGGTCAAGCCAGGGCATATGGAATGCTTGCTGGTGGTTCTGGCATCACCCCAATGTTTCAGCTCACTAGAGCTATATTGGAAAACCCTAaggataaaacaaaattgaaccTTATCTATGCCAATGTTACATTGGATGATATTCTCTTGAAGGAAGAACTGGATCAGCTTGCTAGTAAATATCCTGACCGTTTCCAAGTCTATTATGTTCTAAATCAGCCTCCTGAGTCATGGACTGGTGGGGTTGGGATCGTATCCAAGGAAATGATCCAAAACCATTGTCCCAAACCAGCCAAAGATATCCAGATACTTAGGTGTGGTCCACCAGGAATGAACAAGGCCATGGCTACTCATCTTGATGCACTTGGATACACACCAGAGATGCAGTTTGAATTCTA	887	0.416	MLELPFNTSFRFFKMDLRLPFAEQLQPELVGTAVALVAVGITAAYIYFCKKPRGCLDPKKFKEFQLLKKTQLSHNSARFRFALPTSTSVLGLPVGKNILCRGKDGKGEQVERSYTPITLDSELGYFELVVKMYPQGRMSHHFRQMKEGDYLAVKGPKGRFSYKPGQARAYGMLAGGSGITPMFQLTRAILENPKDKTKLNLIYANVTLDDILLKEELDQLASKYPDRFQVYYVLNQPPESWTGGVGIVSKEMIQNHCPKPAKDIQILRCGPPGMNKAMATHLDALGYTPEMQFEF	295

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva07g01030	295	Pfam	Oxidoreductase FAD-binding domain	64	162	IPR008333	-
	Bva07g01030	295	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	171	190	IPR001709	GO:0016491
	Bva07g01030	295	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	209	220	IPR001709	GO:0016491
	Bva07g01030	295	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	265	273	IPR001709	GO:0016491
	Bva07g01030	295	PRINTS	Cytochrome B5 reductase signature	148	162	-	-
	Bva07g01030	295	PRINTS	Cytochrome B5 reductase signature	209	220	-	-
	Bva07g01030	295	PRINTS	Cytochrome B5 reductase signature	112	119	-	-
	Bva07g01030	295	PRINTS	Cytochrome B5 reductase signature	90	101	-	-
	Bva07g01030	295	PRINTS	Cytochrome B5 reductase signature	265	273	-	-
	Bva07g01030	295	PRINTS	Cytochrome B5 reductase signature	171	190	-	-
	Bva07g01030	295	Gene3D	-	152	295	IPR039261	-
	Bva07g01030	295	ProSiteProfiles	Ferredoxin reductase-type FAD binding domain profile.	59	163	IPR017927	GO:0016491
	Bva07g01030	295	PANTHER	NADH-CYTOCHROME B5 REDUCTASE	1	295	IPR001834	GO:0016491
	Bva07g01030	295	Pfam	Oxidoreductase NAD-binding domain	172	278	IPR001433	GO:0016491
	Bva07g01030	295	Gene3D	Translation factors	54	151	-	-
	Bva07g01030	295	CDD	cyt_b5_reduct_like	64	295	-	-
	Bva07g01030	295	SUPERFAMILY	Ferredoxin reductase-like, C-terminal NADP-linked domain	151	290	IPR039261	-
	Bva07g01030	295	PANTHER	NADH-CYTOCHROME B5 REDUCTASE	1	295	-	-
	Bva07g01030	295	SUPERFAMILY	Riboflavin synthase domain-like	53	164	IPR017938	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva07g01030	Bva-Chr7	11992053	11995505	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva07g01030	45	295	NADPH P450 reductases	AT5G17770	73.307	3.40e-142	400

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva07g01030	K00326		-	gmx:100809584	469.159