Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01016 ATGGGCAGGTTTTCAGCTTTCTGTTTGTTGATGTTAGTTCCCCTTGTTATTGAAGCAGTGCCAAATGAATGTAAAGATTCAAGGTGCGGACCTGATGGTCCACCTATCAGATTCCCTTTCCAGCTCAAAGGTAGCAACAGCTCCAATCAGTGTGGCTATCCAGGTTTTGATCTTATATCTTgtacaaatgaaaaagagacGGTGCTTGAGCTGCCACTGCCAGCAGATCCAGTCCCGGCAAGATTCTATGTTTCCTACATAGATTACAATGCTCAAGAAATTTCGGTATATAAcccaaaagaatattattgcCTTTCAACGCAACTGTTAAAACTTGCTCGTTCTCCATCACTGCTATTCCGATATTACCCTTCTAACCTCACCTTTTTCAActgttctctctcttcctctcctTGTCCCATTCATGTTGTGAAGTTTAATACTGCTGTTTCCACAAAACTTTCATGCTCCAAGATGCTTGATGTTTCATTTCCAGAAGCTTCACGTGATCAGTATCTACGCTTTTTAAGAAACGATAGAGATTATTACTTTTGGATTTCTTGGACAAAACCCAATTGTACAAGGTGCGAAAAACTAGGACAGAAATGTCAGTTCATAGACAATGAAATCCAATGCATCAGTACAAAACATAAAGGTAACATTATTGTTAATGCCCATTCACATTA 686 0.3586 MGRFSAFCLLMLVPLVIEAVPNECKDSRCGPDGPPIRFPFQLKGSNSSNQCGYPGFDLISCTNEKETVLELPLPADPVPARFYVSYIDYNAQEISVYNPKEYYCLSTQLLKLARSPSLLFRYYPSNLTFFNCSLSSSPCPIHVVKFNTAVSTKLSCSKMLDVSFPEASRDQYLRFLRNDRDYYFWISWTKPNCTRCEKLGQKCQFIDNEIQCISTKHKGNIIVNAHSH 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01016 228 Pfam Wall-associated receptor kinase galacturonan-binding 24 97 IPR025287 GO:0030247
Bva07g01016 228 PANTHER RING-H2 FINGER PROTEIN ATL21A-RELATED 6 214 - -
Bva07g01016 228 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 6 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01016 Bva-Chr7 11881612 11882298 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01016 21 208 C3H Transcription Factor Family AT2G46495 31.707 2.98e-18 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01016 - - zju:107414589 132.109