Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00993 ATGGTTTCGTTGAATTTGCTGTCACCGACAAGAGGAAAGGTAATGGAGGGAAGCCAGGTCAGTGCAGATGGaaatcttaaatcttttaattccTCATCTCCAATTATCGCCGTGGCTATCAAGGGAAACAAGAAAAGCAATTATGTGTTACAATGGGCACTCAATAAGTTTGTTCCAGAGGGAATGATCGTCTTCAAGCTGATTCATGTTCAAGCTGCTGcttttaaaaaggaaatggagTGGCAGACGAGTCAATTGCTTCTTCCTTTCAAGAAAATATGTGATCAGAGAAAGGTGCATGTAGATGTTGTAGTGATTGAATCTGATGATGTTGTGACTGCGATAGCAGAGGAAGTTGCTAAAGGTCCCTTAACTAAACTCGTCGTAGGAGCTTCGTCTCGTGGCTTTTTCACAAGtAAACAAAAGGGTCTATCTGCAAAAATCACACTATGCACACCCAGATTTTGTACTGTATATGCTGTTTCTAAGGGAAAGTTGTCTTCCTTACGGCAAGCAGATGTTCAAATTGATGGAAGCATTATAGATGATCATAGTGAAAACAGTTTTTCCACCAGTAGCTCATCAAACTACACTTCCACCACTCAAACAGACTCTGGCTCTATATCTTCATATGCTCCTCCACAATCTGCCTCCTTAGCTGTGCAGCGATTTCAAGCTCTTTCATCTATTAATCAGGCTCTTATAAGCACAAAGCCTAGTTTGGTTGAACTTGAAACTAACCATTCTAGGCACCAGTCTCTAGATCTTGGGAAAGAGAATCTTTTTGCAAGTTCTCCTGTAAAGTCAGATACTGGCCATGCTATGAGCCGGGCCTCGAGTTGCAGAAGCATGCCATCAGATGCTGGATCATGGTTTGCTGAACAAATTATCACCTCAGATGTGCCGTTAGCAACTGAGTTTTCTTCACCTAATAGACAGGATCAGGAAAATTTCAACCTAGAGCTGGAAAAGTTGAGGATTGAGCTAAGACATGCCCAAGGATTACATGCGGTGGCTCAAAGCGAAAGCATTGATGCATCACGAAAGGTAAATGATCTTAGTAAGAGGCGATTAGAGGAATCAATGAAACTGAAGGAAATTATTGCTAAGGAGGAGATGGCCAAAGCATTAGCAAtaagagggagagagaaataTGAAACTGCAAGAAGAGAAGCTGAGTATTTGAAAGAATGTGCTGAAATAGAAGCTGCAGATAGAAAAGAAGTAGAGGTTAAAGCTGCACGTGCTGCCAAAGATAAGGAAAAGCTAGAGGATGCTCTTACCGGTTCATCTCCCCAGTACAGGAAGTTTGAATGGGATGAAATTGTTTCTGCTACCTCATCTTTCTCCGAGGATCTGAGAATTGGAATGGGAGCATATGGGACGGTGTACAAGTGCAGTTTGTTTCATACAACTGTGGCTGTTAAAGTTCTCAACTCTGCAGGGAACCAAAAAAGCAAGCAATTCCTGCAGGAGGTAGAAATCTTGAGTAGAATTCGTCATCCAAATTTACTTCTCCTTCTTGGTGCATGTCATGATCATGGATGCCTTGTATATGAATATATGGAGAATGGTAGCTTGGATGACAGGTTACTCAGAAAGAATAGTACACCCCCAATACCTTGGTTTGAGAGGTACCGAATTGCTTGGGAAGTAGCCTCAGCTCTTGCCTTTCTTCACAACTCAAAGCCCATGCCTATCATCCATCGTGATTTGAAACCGGCAAACATCTTGCTTGATCGTAACCTTGTGAGCAAGATTGGTGATGTTGGCCTTTCTACAATGCTTGATTCAGACACATTATCAACCATGTATAAGGACACAGCACCTGTTGGGACACTCTGCTACATAGATCCTGAGTACCAAAGGACCGGGTCCATATCTCCAAAATCTGATGTTTATGCTTTTGGAATGGTGATCTTACAGTTATTGACAGCAAAACCCGCAATCGCACTCGCACATGTGGTAGAAACAGCAATTGAGGATGGAAATTTAACAGATATATTGGATCCTGAGGCAGGGAATTGGCCATTTCCGGAGACACTGGACTTAGCTCGGTTGGGACTGAGCTGTGCAGAACTTAGGCGTATAGACAGGCCAGATTTGCAAGATCATGTCATTCCTACCCTGGAGAGATTGAGAGAAGTTGCTGATAGGGCAAACGCTTCTGTTTCAGCTGCAGCTTCTGCTTCAAGTGTTAAATCCAGACCTCCTAGTCACTTTATCTGCCCAATACTTCAGGATGTTATGGAAGATCCTTGTGTTGCCGCAGATGGATACACGTATGATCGTAAAGCAATAGAACAATGGTTTCTAGATAAAGATAAATCACCAATGACAAATATATCATTGCCTCATAAGAGCCTAATTCCTAATTACACACTTCTATCGGCAATCTTGGAGTGGAAATCAAGAGGAAAGTG 2423 0.4152 MVSLNLLSPTRGKVMEGSQVSADGNLKSFNSSSPIIAVAIKGNKKSNYVLQWALNKFVPEGMIVFKLIHVQAAAFKKEMEWQTSQLLLPFKKICDQRKVHVDVVVIESDDVVTAIAEEVAKGPLTKLVVGASSRGFFTSKQKGLSAKITLCTPRFCTVYAVSKGKLSSLRQADVQIDGSIIDDHSENSFSTSSSSNYTSTTQTDSGSISSYAPPQSASLAVQRFQALSSINQALISTKPSLVELETNHSRHQSLDLGKENLFASSPVKSDTGHAMSRASSCRSMPSDAGSWFAEQIITSDVPLATEFSSPNRQDQENFNLELEKLRIELRHAQGLHAVAQSESIDASRKVNDLSKRRLEESMKLKEIIAKEEMAKALAIRGREKYETARREAEYLKECAEIEAADRKEVEVKAARAAKDKEKLEDALTGSSPQYRKFEWDEIVSATSSFSEDLRIGMGAYGTVYKCSLFHTTVAVKVLNSAGNQKSKQFLQEVEILSRIRHPNLLLLLGACHDHGCLVYEYMENGSLDDRLLRKNSTPPIPWFERYRIAWEVASALAFLHNSKPMPIIHRDLKPANILLDRNLVSKIGDVGLSTMLDSDTLSTMYKDTAPVGTLCYIDPEYQRTGSISPKSDVYAFGMVILQLLTAKPAIALAHVVETAIEDGNLTDILDPEAGNWPFPETLDLARLGLSCAELRRIDRPDLQDHVIPTLERLREVADRANASVSAAASASSVKSRPPSHFICPILQDVMEDPCVAADGYTYDRKAIEQWFLDKDKSPMTNISLPHKSLIPNYTLLSAILEWKSRGK 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00993 807 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 736 807 IPR013083 -
Bva07g00993 807 Gene3D Transferase(Phosphotransferase) domain 1 522 733 - -
Bva07g00993 807 SUPERFAMILY Protein kinase-like (PK-like) 431 704 IPR011009 -
Bva07g00993 807 ProSiteProfiles Protein kinase domain profile. 449 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva07g00993 807 SUPERFAMILY RING/U-box 727 805 - -
Bva07g00993 807 Gene3D Phosphorylase Kinase; domain 1 427 521 - -
Bva07g00993 807 Coils Coil 404 426 - -
Bva07g00993 807 Pfam U-box domain 738 804 IPR003613 GO:0004842|GO:0016567
Bva07g00993 807 ProSitePatterns Serine/Threonine protein kinases active-site signature. 567 579 IPR008271 GO:0004672|GO:0006468
Bva07g00993 807 CDD RING-Ubox_WDSUB1_like 741 781 - -
Bva07g00993 807 SMART serkin_6 449 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva07g00993 807 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 36 138 - -
Bva07g00993 807 PANTHER OS02G0152300 PROTEIN 32 803 - -
Bva07g00993 807 ProSitePatterns Protein kinases ATP-binding region signature. 455 476 IPR017441 GO:0005524
Bva07g00993 807 ProSiteProfiles U-box domain profile. 736 807 IPR003613 GO:0004842|GO:0016567
Bva07g00993 807 Coils Coil 315 342 - -
Bva07g00993 807 CDD STK_N 35 164 - -
Bva07g00993 807 SMART Ubox_2 740 802 IPR003613 GO:0004842|GO:0016567
Bva07g00993 807 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 35 32 803 - -
Bva07g00993 807 MobiDBLite consensus disorder prediction 186 212 - -
Bva07g00993 807 Pfam Protein kinase domain 452 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00993 Bva-Chr7 11741594 11746884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00993 33 804 U-box Gene Family AT4G25160 50.240 0.0 775
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Bva07g00993 Pkinase 2.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00993 - - gmx:100801699 1108.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g00993 07 11741594 11746884 Bva07g00993 07 11741594 11746884 ECH