Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00987 ATGGGGATAGATCTGGAGCTGCCTTCTGAAGAATATCATAAGGAGGACACTGGGCatcatgaaaatattaatatggtGGATGGAGCAGAAGGAGATGTTAGAAATCGGCCCACAAATTCTTTCGAAGTTGTTGGAAATGGTAAGGAGAATGCCGGGCCTAATATAAATGCTGACTTAGCAGATTGTAGAAATAAGGAGTACACTGGACAAGGAATCAACTTgaattcttcaaaattattagagCCTCCTGATGGAATGGAGTTTGATTCGAAGGAGGAAGCTTTCTCATATTACAAAGAATATGCCAAATCCATGGGATTTGCTGCCATAATAAAGGCCAGCCGTCGATCCAGAATATCTGGAAAGTTTATTGACGCAAAATTTGCATGTACCAGATATGGAAGCAAGCGAGAATGTGGTGCAGATGAGACCTCAGAATCTCTTCCAAATACAGACAACAACATTCCCGTAAAAAGGAAACGTGGTAGAGTGAATTTGTCTTGGACAAAAACAGATTGCaaagcatgcatgcatatcaAGAGAAGGCAAGATGGTAGATGGTTTATCTCTACTTTCATAAAAGAGCATAACCATGAAATTTTCCCTGTCCAAGTCTATTACTTTAGGGGACATAGGAACCTAGAtcttggaaataaaaatattgatgcaTTACATGCCATCAGGGCAAGAACAAAAAAGATGTATGTTACAATGTCCAGAAAATCTGGTGGGTATAAGAAAATTGACAAACAAAAAAGTGGCACTAGAAAACAGATAGGTGTTGTGCAACATTTGGCTTTAGATGAAAGGGATATTCAAGCTATGCTTGACCATTTTATGTATATGCAAGATGATAATCCTAACTTCTTTTATGCAATAGATTTGAATGAAGACCAACAACTAAGAAATGTTTTCTGGGTGGATGCTAAAGGTAGGCTTGATTATAGAAACTTTGCTGACGTGGTTCTTTTTGACACCACGCATATCAAGAACGAATATAAGCTTCCTTTTATTCCCTTTATTGGTGTGAACCACCACTTCCAGTTCCTGTTGCTTGGATGTGCATTAGTTTCGGATGAATCTAAATCAACATATACGTGGCTGATGCAGGCATGGTTCAGGGCAATGGGTGGACGTTCTCCAAAGGTAATACTTACAGACCAAGACAAAGTTCTGAAAGAGGCTGTTGCAGAAGTGCTTCCTAGATCTCGTCATTGTTATTGTTTGTGGCATATCTTGAGCAAAATTCCAGAAAATCTCGGTTATGTACTAAGGCAACATGAAAGTTTTATGACTGAATTTAACAAATGTGTTCTCAAGTCTTGGACAAACGAGCAGTTTGAGAAGAGATGGTGGAAAATGGTTGAGAGATTCAATTTAGGTGATGACAACTGGTTGAGGTCACTTTATGAGGACCGGGATCAGTGGATTCCTACATATATGAGAGGCACTTTTTTAGCTGGGATGTCTACAATGCAACGACCTGAAAGTCTAAACTGTTTGTTGGACAAATATATGCAGAGGAAAACAACTATGAAAGAATTTTTGGAGCAATATAAGGGGATATTAAGAGAGAAATGTGAAGAGGAAGCAAAATTGGATTTTGAAACTTTACATAAACAAGCAGCATTAAAGTCTCCCTCACcttttggaaaacaaatgGTATCATTGTACACACACTCAATATTCAAGAAATTCCAAAGCGAGGTTTTGGGAGTTGTTGCCTGTCatccaagaaaagaaagtgaagatGGACCAACAAATATGTTCAGGGTTCaagattttgaagagaatCAAGATTTTGTTGTCACATGGAGCGAAACAACTGCCGATGCATCTTGTTCATGCCATTTGTTTGAATTCAATGGTTTTCTTTGTAGGCATGTGATGATTGTTCTACAGATTTCTGGTGTGCACAACATCCCGTCTCAGTATATATTGAAACGCTGGACAAAAGATGCAAAGAATAGACAAATAGCTAGAGAGGTGTCAGATGTGGTTGACTCTAGGGTTAAGCGCTATAATAATCTCTGTCAACGGGCATTTGAGCTGGGTGATGAAGGGTCTTTATCACATGAGAGTTACGACTTTGCTGTGAATGCTCTGGAAGAAGCTTTGAGAAAGTGTGAGAGCATGAATAACACTATTGAGAGTGTCACAGAACCGAGATCACCAACTTTTAGTTCTGAAGAGGTGAACTTGAGTAACAGTACTGGTAACACAAATAAAAGGAATACTACTTTGAACAAAAGGCAGgTACATCCAGAGCCTGAGATCATTGCTATTGGAATTGATAGCAGTTGGCAGCAAATGGCAAACTCTAATACGCGAGCAGTGGGAGTTGACTGTCCTTATGAATCACAGCAGAGCATTCAGGAGATGGATCAGCTGAACTCAAGAGCTCAAAACCTAGATGGCTATTTCACCACTCAACAGATTTTTTCGGGAATGGCACAATTGAACTCAATAGGTGCCAGCCGTAATGATTATTACAGCACCCAGCATGGAATCCAAGGCCTGGGACAATTGAACTCAATTGCACCTGTCCGCGATGCTCATTACATGACTCCACAAAGACTGCATGGGATGGCCCAGTTGCATTTCAGACAACGAGCAATCCCAAGTTGTTTTGATGTTCAAGATGATTTACGAAATATGGATCATTCCACTGAAGAACACCCTCAATCGAATGGCACGGGGGGAAAACAACTAAATTCAAGGCACCTTTCGCAATA 2735 0.3832 MGIDLELPSEEYHKEDTGHHENINMVDGAEGDVRNRPTNSFEVVGNGKENAGPNINADLADCRNKEYTGQGINLNSSKLLEPPDGMEFDSKEEAFSYYKEYAKSMGFAAIIKASRRSRISGKFIDAKFACTRYGSKRECGADETSESLPNTDNNIPVKRKRGRVNLSWTKTDCKACMHIKRRQDGRWFISTFIKEHNHEIFPVQVYYFRGHRNLDLGNKNIDALHAIRARTKKMYVTMSRKSGGYKKIDKQKSGTRKQIGVVQHLALDERDIQAMLDHFMYMQDDNPNFFYAIDLNEDQQLRNVFWVDAKGRLDYRNFADVVLFDTTHIKNEYKLPFIPFIGVNHHFQFLLLGCALVSDESKSTYTWLMQAWFRAMGGRSPKVILTDQDKVLKEAVAEVLPRSRHCYCLWHILSKIPENLGYVLRQHESFMTEFNKCVLKSWTNEQFEKRWWKMVERFNLGDDNWLRSLYEDRDQWIPTYMRGTFLAGMSTMQRPESLNCLLDKYMQRKTTMKEFLEQYKGILREKCEEEAKLDFETLHKQAALKSPSPFGKQMVSLYTHSIFKKFQSEVLGVVACHPRKESEDGPTNMFRVQDFEENQDFVVTWSETTADASCSCHLFEFNGFLCRHVMIVLQISGVHNIPSQYILKRWTKDAKNRQIAREVSDVVDSRVKRYNNLCQRAFELGDEGSLSHESYDFAVNALEEALRKCESMNNTIESVTEPRSPTFSSEEVNLSNSTGNTNKRNTTLNKRQVHPEPEIIAIGIDSSWQQMANSNTRAVGVDCPYESQQSIQEMDQLNSRAQNLDGYFTTQQIFSGMAQLNSIGASRNDYYSTQHGIQGLGQLNSIAPVRDAHYMTPQRLHGMAQLHFRQRAIPSCFDVQDDLRNMDHSTEEHPQSNGTGGKQLNSRHLSQ 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00987 911 MobiDBLite consensus disorder prediction 717 745 - -
Bva07g00987 911 Coils Coil 911 911 - -
Bva07g00987 911 Coils Coil 695 715 - -
Bva07g00987 911 MobiDBLite consensus disorder prediction 887 911 - -
Bva07g00987 911 Pfam FAR1 DNA-binding domain 96 202 IPR004330 -
Bva07g00987 911 SMART 26again6 612 639 IPR006564 GO:0008270
Bva07g00987 911 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 69 789 - -
Bva07g00987 911 Pfam MULE transposase domain 321 414 IPR018289 -
Bva07g00987 911 MobiDBLite consensus disorder prediction 892 911 - -
Bva07g00987 911 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 69 789 IPR031052 GO:0006355
Bva07g00987 911 ProSiteProfiles Zinc finger SWIM-type profile. 601 637 IPR007527 GO:0008270
Bva07g00987 911 Pfam SWIM zinc finger 603 633 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00987 Bva-Chr7 11701561 11707852 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Bva07g00987 FAR1 2.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00987 - - jre:118348321 1310.05