Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00971 ATGGGTTTTCGTTTACCTGGTATTAGAACTAGAAGGGCATCATTTTCTGCAGAACAAGCAGCTTCCAAGTCAGCTGGAGTCCCTAAAGGTTGCCTTGCAGTTTATGTTGgtgaagaaatgaagaggTTTATCATTCCCATAACATACTTGAACCAACCTTCTTTCCAAGAATTGCTTGGCCAagctgaagaagaatttggatATGATCATCCAATGGGTGGCCTCACAATTCCTTGTAGAGAAGACCTGTTTATAGAAGTTACTTCTCGGTTGAATGGGCAATA 284 0.3627 MGFRLPGIRTRRASFSAEQAASKSAGVPKGCLAVYVGEEMKRFIIPITYLNQPSFQELLGQAEEEFGYDHPMGGLTIPCREDLFIEVTSRLNGQ 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00971 94 Pfam Auxin responsive protein 11 90 IPR003676 GO:0009733
Bva07g00971 94 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 4 93 IPR003676 GO:0009733
Bva07g00971 94 PANTHER AUXIN-INDUCED PROTEIN X10A 4 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00971 Bva-Chr7 11572162 11572446 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00971 4 84 Calmodulin-binding Proteins AT5G20810 46.914 4.73e-18 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00971 K14488 - gmx:100816803 147.517