Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00966 ATGGGTTTCCGTTTACCTAGTATTAGGAGGGCATCATTTGCTGCAAACCAAGCATCTTCCAAATCTCTTGAAGTACCAAAAGGCTACCTAGCAGTTTATGTTGGACAAGAAATGAAGCGGTTCATCATTCCGATGTCATACTTGAACCAACCTTTGTTCCAAGAATTACTTAGCCAAGCTGAAGAAGAGTTTGGATATGATCATCCCATGGGAGGCCTCACTATTCCTTGCGGAGAGGATGTGTTTGTAGACCTTACTTCTCGCTTGAATGGGCAATA 278 0.4281 MGFRLPSIRRASFAANQASSKSLEVPKGYLAVYVGQEMKRFIIPMSYLNQPLFQELLSQAEEEFGYDHPMGGLTIPCGEDVFVDLTSRLNGQ 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00966 92 Pfam Auxin responsive protein 10 88 IPR003676 GO:0009733
Bva07g00966 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
Bva07g00966 92 PANTHER AUXIN-INDUCED PROTEIN 6B 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00966 Bva-Chr7 11563227 11563652 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00966 24 82 Calmodulin-binding Proteins AT3G43120 61.017 5.39e-21 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00966 K14488 - gmx:100806671 162.925