Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00960 ATGGGTTTTCGCTTGCCTGGCTTCAAAAGGGCTTCCTCATTTGGAGCTAAACTAGCATCTACAAAAGCAGTGGATATACCAAAGGGCTATCTTGCAGTCTATGTTGGAGAGACAATGAAGCGGTTTGTGATTCCCATATCACACTTGAGCCAGCCTTCTTTTCAAGAATTGTTGATTCAAGCTGAGGAAGAGTTTGGGTTTCATCATCCAATGGGAGGCCTAACAATTCCTTGCAGTGAAGATGTCTTCCTATCTAGCTTGAATGGGTG 269 0.4387 MGFRLPGFKRASSFGAKLASTKAVDIPKGYLAVYVGETMKRFVIPISHLSQPSFQELLIQAEEEFGFHHPMGGLTIPCSEDVFLSSLNG 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00960 89 Pfam Auxin responsive protein 13 86 IPR003676 GO:0009733
Bva07g00960 89 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 85 IPR003676 GO:0009733
Bva07g00960 89 PANTHER AUXIN-INDUCED PROTEIN 10A5 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00960 Bva-Chr7 11550578 11550847 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00960 25 83 Calmodulin-binding Proteins AT3G43120 57.627 6.45e-18 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00960 K14488 - gmx:100500483 134.035