Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00948 ATGGGTTTTCGCTTGCCTGGCATCAAAAGAGCTTCATCGTTTGGAGCTAAACTAGCATCTACAAAAGCAGTGGATGTGCCAAAGGGCTATCTTGCAGTCTATGTTGGAGAAACCATGAAGCGGTTTGTGATTCCCATATCACACTTGAGTCAACCTTCATTTCAAGAATTATTGAGTCAAGCTGAGGAAGAGTTTGGATTTCATCATCCAATGGGAGCCTTAACAATTCCTTGCAGTGAAGATGTCTTCCTATCTAGCTTGAATGGGTGCTA 272 0.4265 MGFRLPGIKRASSFGAKLASTKAVDVPKGYLAVYVGETMKRFVIPISHLSQPSFQELLSQAEEEFGFHHPMGALTIPCSEDVFLSSLNGC 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00948 90 Pfam Auxin responsive protein 14 86 IPR003676 GO:0009733
Bva07g00948 90 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 85 IPR003676 GO:0009733
Bva07g00948 90 PANTHER AUXIN-INDUCED PROTEIN 10A5 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00948 Bva-Chr7 11516243 11516693 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00948 25 83 Calmodulin-binding Proteins AT3G43120 61.017 3.08e-19 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00948 K14488 - gmx:100806671 135.961