Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00933 ATGGAAGAGAATTCACAGTCCGTGGTATTTGTACCAGTGGATtatagagaaaagaaggaactaGAGAAAAGGTCGAGAAGAGCCTCTCTGCGGGGAAGCTGTGAAGGGTTGAAGGTAGAAGTTGGGGTTCCTCAGGCGCTGAATGACCTGAGACAGTCCAAGAAGGCCCTGATAACTTCCCACATCAACACTCACCACAAGgAGGAGGTGGAaaaagcaaagattgataaaGGTCACGAAGCAGATGGTGTAAAATCCAACATTTGCAAGGAATGTGATGCTACTTTCAAAAAACCTGCCTACTTGATACAACACATGCAATCCCATTCACTTGAGggaaataatttata 350 0.4 MEENSQSVVFVPVDYREKKELEKRSRRASLRGSCEGLKVEVGVPQALNDLRQSKKALITSHINTHHKEEVEKAKIDKGHEADGVKSNICKECDATFKKPAYLIQHMQSHSLEGNNL 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00933 116 ProSiteProfiles Zinc finger C2H2 type domain profile. 87 114 IPR013087 -
Bva07g00933 116 ProSitePatterns Zinc finger C2H2 type domain signature. 89 109 IPR013087 -
Bva07g00933 116 SUPERFAMILY beta-beta-alpha zinc fingers 83 110 IPR036236 -
Bva07g00933 116 Pfam Zinc-finger of C2H2 type 89 109 - -
Bva07g00933 116 Gene3D Classic Zinc Finger 43 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00933 Bva-Chr7 11407609 11410102 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva07g00933 zf-met 0.00042 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00933 K09191 - rcu:8276082 94.3597