Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00923 ATGTACATCAAAGAGGTTTGCTTAGAGGGTTTTAAGTCTTATGCTAATAGAACTGTTGTCCCGGGGTTTGACCCTTTCTTCAATGCCATTACGGGGTTGAATGGTTCGGGCAAGTCGAACATACTCGATTCGATTTGCTTTGTGTTGGGTATCACGAATTTGCAGCAGGTTCGAGCTTCCAACCTTCAGGAGCTCGTGTATAAGCAAGGACAGGCAGGGATTACGAAGGCCACAGTgtctattttgtttgataattcGGATAGGAGTCGAAGCCCATTTGGATATGAAGATAATCCAGAGATTACAGTCACAAGACAGATTATAGTTGGAGGTAGGAACAAATATTTGATCAATGGGAAACTTGCCCAGCCTAGTCAAGTTCAGAACCTTTTTCATTCGGTGCAGCTTAACGTTAATAACCCACATTTCCTCATAATGCAAGGGCGCATCACCAaggttttaaatatgaaaccaCCTGAGATATTATCTATGCTTGAGGAAGCTGCAGGGACAAGAATGTATGAGTCTAAGAAAGAGAATGCTCTCAAAACACTTGAGAAGAAGCAGAACAAGGTTGATGATATTAACAACCTTCTTGATCAGGAGATAATACCTGCTCTGGAGAAGTTAAGGAAAGAAAGGATGCAGTACATGCAATGGGCCAATGGCAATGCTGAATTAGATAAGTTGAGAAGGTTTTGTATTGCTTATGAATATGTGCAAGCAGAGAGGATTAGAGACAGTGCTGCATCTGACTTAGAGCAAGTAAAGGCCAAGATAGCTGAGATTGATGACAGTAATTTGAAGAACCAGGCAGAAGTAGAGGAAATGGAGAAAGAAGTAGCAAAGTTGACCGCTGAAAAGGAGGCATGCATGGGTGGGGAAGTAAAATCTATGTCTGACAAGGTGGATGCACTTGCTCAGGATCTTGTGAGAGAGACGTCTGCACTGAATAATAAAGAGGACACACTAAGGAGCGAAAAAGCCAATGAACAAAACatTGTTAGTAATATTCAAGACCTGAAGCAATCTATAGAAGTGAAGGCCTCTGCTGTTAGAAAGGCTGAAGAGGGAGCAGTAGatctgaaaaagaaagttgacgATCTTTCTAAGAGCCTGGAAGAGCATGAAAAGGAGTACCAGGGTGTATTAGCTGGAAAGAGCAGTGGAAATGAGGAGAAATGCTTAGAGGACCAGCTAGCTGATGCAAAAGTTGCAGTTGGGAGTGCTGAAACAGAACTGAAACAGCTGAAGACCAAAATTAGCCACTGTGAGAAGGaactaaaagagaaaacaaatcaattaaggtCAAAGGGTGAAGAAGCTATTTCTGTAGAAAATGAGCTCAATGCAAGGAGAAAAGATGTTGAAAATGCCAAAACGGAATTGGAGTCTCTTCCTTACAAAGAGGGTGAGATGGAAGCTTTGCAAAAGGAACATGCGTTTGAGGCAGAGTGTGTGCAAAAGTGGAAGGATGAAATACGCAAACTTTCAGCTCAATTAGCAAATGTTGAATTTACATACCGTGATCCAGTCAAGAATTTTGACAGGTCAAAAATTAAGGGCGTGGTTGCAAAACTTATCAAAGTAAAGGATAGGTCCACAATGACTGCCCTAGAGGTTACTGCTGGTGGAAGGTTGTTTAATGTTGTAGTTGACACAGAAACTACAGGAAAGCAGCTTCTGCAGAATGGTGATCTAAGAAGAAGAGTAACAATTATACCTTTGAACAAAATACAACCTCATACTGTTCCCTCTAGGGTTCAACAAGCTGCTTCTAGAATAGTTGGCAAGGAGAATGCTGAACTGGCACTTTCTTTGGTTGGCTATGATGAAGAATTGAAGAGTGCCATGGAATTTGTATTTGGTTCAACCTTTGTTTGCAAAACCATTGATGTTGCAAAGGAGGTCACATTTAATCGGGAAACTCAGACCCAAAGTGTCACTCTTGAAGGAGACATATTCCAGCCAAGTGGTCTTCTGACTGGTGGAAGCCGGAAGGGTGGTGGTGATCTTTTAAGGCAACTTCATGCTTTGGCAGAGGCTGAGTCCAAGCTTTCACTACATCAAAGAAGATTGTCTGAGATTGAAGCACAGATTGAAAAGCTGCTTCCTCTTCAGAAAAGATTCAAGGACCTCAAGACACAATTAGAACTCAAATCATATGATCTTTCATTGTTTCAAGGCAGGGCTGAGCAAAATGAGCATCATAAGCTTGGTGAATTAGTAAAGAAGATAGAGCAAGAGCTTGAAGAAGCAAAATCTTCAGTCAGGGAAAAGCAACTTTTGTATGAAAACTGTGTCAAGTCAGTTTCAACTCTTGAGAAATCAATCAAAGAACATGACTACAATCGGGATAATAGGCTGAAagaattggagaaaaaaataaaatcaataaaatctcAGATGCAGTCTTCTTTGAAAAATCTCAAGGGACATGATAATGAAAAGGAGAGGCTTGTAATGGAAATGGAAGCTGTTATCCAGGAGCATGCATCCTTGGAAAGTCAACTGGCTTCTTTGAGAACACAGATTAATAGTCTTGCTTCTGAAGTAGAAGAGCGAAGGTCCAGGGTTGCTTCTGCAAGGGATCACCATGATCAGTTGCAGTCAGAGCTAAACTCAATTCGCCTGAAAATGAAGGAATGTGATAAGGAAATCAGTGATATTGTTAAGGAGcaaaaaaaacttgaatataaaattaccgAGAGTAATCTTGCAAGGAAGAGGATGGAAAATGAGataaaaagaatGGAGATGGAACAGAAAGATTGTTCTCTGAGGGTGGACAAATTAGTAGAGAAGAATGCATGGATCCTATCTGAGAAAAAGTTTTTTGGTAAAAGTGGGACtgattatgatttttcttcttgtgatCCTCGCAAAGCAAGTGAAGAACATGAGAAGCTTCGGGCTGAACAATCTGGGCTTGAGAAAAGGGTGAACAAGAAAGTAATGGCAATGTTTGAGAAGGCAGAAGATGAGTATAATAAACTGATTGATAGGAAAAACATAATTGAGGCTGACAAGACCAAAATCAAGAATGTGATTAAAGAACTTgatgagaagaagaaggaaacatTAAGTGTCACCTGGAACAAAGTTAACAATGACTTTGGGTCCATCTTTTCTACACTATTACCGGGTGCAACGGCTAAGTTAGAACCTCCTGAAGGGTGCAGTTTTCTTGATGGTCTTGAGGTTCGTGTTGCATTTGGAGGTGTGTGGAAACAGTCCTTGTCGGAATTGAGTGGAGGTCAACGATCACTCCTTGCACTTTCTCTGATTCTAGCACTGCTTCTATTCAAACCTGCTCCACTTTACATCCTAGATGAGGTTGATGCGGCTCTTGACTTAAGCCACACACAGAACATAGGGAGAATGATAAAAGCTCATTTTCCACACTCCCAGTTTATTGTGGTTTCACTAAAGGAAGGCATGTTCAACAATGCAAATGTTCTTTTCCGGACAAAATTTGTTGATGGTGTTTCAACTGTTCAGCGAACTGTTACTAAACAGAAGTG 3524 0.3905 MYIKEVCLEGFKSYANRTVVPGFDPFFNAITGLNGSGKSNILDSICFVLGITNLQQVRASNLQELVYKQGQAGITKATVSILFDNSDRSRSPFGYEDNPEITVTRQIIVGGRNKYLINGKLAQPSQVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPPEILSMLEEAAGTRMYESKKENALKTLEKKQNKVDDINNLLDQEIIPALEKLRKERMQYMQWANGNAELDKLRRFCIAYEYVQAERIRDSAASDLEQVKAKIAEIDDSNLKNQAEVEEMEKEVAKLTAEKEACMGGEVKSMSDKVDALAQDLVRETSALNNKEDTLRSEKANEQNIVSNIQDLKQSIEVKASAVRKAEEGAVDLKKKVDDLSKSLEEHEKEYQGVLAGKSSGNEEKCLEDQLADAKVAVGSAETELKQLKTKISHCEKELKEKTNQLRSKGEEAISVENELNARRKDVENAKTELESLPYKEGEMEALQKEHAFEAECVQKWKDEIRKLSAQLANVEFTYRDPVKNFDRSKIKGVVAKLIKVKDRSTMTALEVTAGGRLFNVVVDTETTGKQLLQNGDLRRRVTIIPLNKIQPHTVPSRVQQAASRIVGKENAELALSLVGYDEELKSAMEFVFGSTFVCKTIDVAKEVTFNRETQTQSVTLEGDIFQPSGLLTGGSRKGGGDLLRQLHALAEAESKLSLHQRRLSEIEAQIEKLLPLQKRFKDLKTQLELKSYDLSLFQGRAEQNEHHKLGELVKKIEQELEEAKSSVREKQLLYENCVKSVSTLEKSIKEHDYNRDNRLKELEKKIKSIKSQMQSSLKNLKGHDNEKERLVMEMEAVIQEHASLESQLASLRTQINSLASEVEERRSRVASARDHHDQLQSELNSIRLKMKECDKEISDIVKEQKKLEYKITESNLARKRMENEIKRMEMEQKDCSLRVDKLVEKNAWILSEKKFFGKSGTDYDFSSCDPRKASEEHEKLRAEQSGLEKRVNKKVMAMFEKAEDEYNKLIDRKNIIEADKTKIKNVIKELDEKKKETLSVTWNKVNNDFGSIFSTLLPGATAKLEPPEGCSFLDGLEVRVAFGGVWKQSLSELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMIKAHFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVTKQK 1174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00923 1174 Coils Coil 736 763 - -
Bva07g00923 1174 Coils Coil 901 928 - -
Bva07g00923 1174 Gene3D - 446 590 - -
Bva07g00923 1174 Pfam RecF/RecN/SMC N terminal domain 2 435 IPR003395 -
Bva07g00923 1174 Gene3D - 591 666 - -
Bva07g00923 1174 Coils Coil 982 1026 - -
Bva07g00923 1174 SMART SMC_hinge_2 518 638 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Bva07g00923 1174 Coils Coil 789 886 - -
Bva07g00923 1174 Gene3D - 1 202 IPR027417 -
Bva07g00923 1174 Coils Coil 352 379 - -
Bva07g00923 1174 Coils Coil 171 198 - -
Bva07g00923 1174 SUPERFAMILY Smc hinge domain 491 686 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Bva07g00923 1174 Pfam SMC proteins Flexible Hinge Domain 518 637 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Bva07g00923 1174 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 2 1 1173 - -
Bva07g00923 1174 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 1157 IPR027417 -
Bva07g00923 1174 Coils Coil 679 699 - -
Bva07g00923 1174 Coils Coil 487 507 - -
Bva07g00923 1174 Pfam RecF/RecN/SMC N terminal domain 844 1161 IPR003395 -
Bva07g00923 1174 PIRSF SMC 1 1158 IPR024704 GO:0005524|GO:0016887
Bva07g00923 1174 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 2-2 1 1173 - -
Bva07g00923 1174 Coils Coil 400 466 - -
Bva07g00923 1174 CDD ABC_SMC2_euk 1 156 IPR027120 GO:0005524|GO:0016887
Bva07g00923 1174 Gene3D - 995 1174 IPR027417 -
Bva07g00923 1174 Gene3D - 802 890 - -
Bva07g00923 1174 Coils Coil 260 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00923 Bva-Chr7 11352162 11361998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00923 3 170 Structural Maintenance of Chromosomes family AT5G15920 22.619 3.19e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00923 K06674 - gmx:100788674 1868.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g00923 07 11352162 11361998 Bva07g00923 07 11352162 11361998 ECH