Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00889 ATGCACCATGATTGTTCTCCACCAATAATTCATAGAGACATATCAAGTAAGAACATTCTGTTGTCCTCCAATCTTGAAGCTCATATCTCAGAATTTGGCACTGCAAGGTTTCTGAAGCCTGATTTACCTATTTGGACAACATTTGCTGGAACATTTGGCTATGCTGCTCCAGGTGATGTAGCACAGTGTTGCATCATAACTATGTCTAAACTCTGTAATAGTCCagctaattcaaaaattttcagttCATG 251 0.3625 MHHDCSPPIIHRDISSKNILLSSNLEAHISEFGTARFLKPDLPIWTTFAGTFGYAAPGDVAQCCIITMSKLCNSPANSKIFSS 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00889 83 Pfam Protein kinase domain 5 58 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva07g00889 83 PANTHER LRR RECEPTOR-LIKE KINASE 1 67 - -
Bva07g00889 83 Gene3D Transferase(Phosphotransferase) domain 1 1 75 - -
Bva07g00889 83 ProSiteProfiles Protein kinase domain profile. 1 83 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva07g00889 83 ProSitePatterns Tyrosine protein kinases specific active-site signature. 9 21 IPR008266 GO:0004672|GO:0006468
Bva07g00889 83 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 67 - -
Bva07g00889 83 SUPERFAMILY Protein kinase-like (PK-like) 1 57 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00889 Bva-Chr7 10842098 10842349 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00889 1 71 Receptor kinase-like Gene Family AT4G08850 54.054 4.35e-22 86.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva07g00889 Pkinase 2.7e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00889 - - gmx:100814345 108.612