Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00870 AtgaaaccttttcttttctctctcttcttcttcttcttctttttccaaacTCAAATAGTGTTCTCTGCTACAACTCTCTCTCTAGAAATCCTCTCCCTGCTTGCACTAAAAAATTCCATCGTAGACCCTCACAAGTTCCTCCATGACTGGGATCCTGCTTCCACCTTCACCAAGTCTAATTACCAAGACCCAGTTTGGTGTTCATGGACAGGTATCACATGTCATTCTAGGACAAGCCAAATCACTAACCTTGACCTCTCAAATCGCAACCTTTCGGGCACAATTCCACCAGAAATCAGGTACTTGTCGAGCTTAGTTCACTTGAATCTGAGTGGGAATGACTTCGGTGGGAATCTCCAAGCAGcaatttttcaactttctgAGCTCAGGACTCTAGATATCAGTCACAACTACTTCAATTCAACTTTCCCACCTGGGATTTCAAAGCTCAAGTTCTTAACGGTCTTCAATGCTTACAGCAATAACTTCATTGGACCTTTGCCAGAAGAATTCATCAGGCTCCGGTTTCTTGAGCAGCTCAACCTTGGTGGGAGCTACTTCAGCGACAGGATTCCATCAGGGTATGGCAGTTTCCCAAGattgaaaattctttatttggCTGGCAATGCCTTGGAGGGTCCAATTCCACCTCAGTTAGGCTTCTTAGCTCAGCTAGAACGCTTGGAAATTGGATACAATAATTTCTCTGGCGAATTACCAGCAGAACTTGCACTTTTATCAAACCTCAAATATTTAGATATCTCCTCTGCTAACCTCTCTGGAAGACTGAGACCAGAGCTTGGCAACCTGACCTCGCTGGAGAACTTGTTGCTATTCAAGAATCACTTTACTGATCAAATTCCGTCAACCTTAGGCAATTTGAAAGTACTAAAAGCTCTTGATTTGTCAGATAATCAGTTAACTGGGTCAATTCCTCAAGCACTTGGCACACTAAAGGAACTAACCAAGTTGAGCTTAATGATGAACAAGCTAACAGGTGAAATACCACAAGAATTTGGAGACCTTCCCAACCTCGAGCTTTTTCATCTATTCAACAACTCACTATCTGGGTTTCTTCCACAGAAGCTTGGCTCCAATGGATTGCTTCAGAGACTTGATGTGTCGACAAACTCACTCTCTGGTCCAATGCCACCAACCATTTGCAATGGAAACAATGTCATCAAGCTCATTCTCTTCAACAACAAGTTCCAAGGACTTCTCCCAGCATCACTCACAAAATGTTCTTCACTAACAAGGCTCAGAATACAAAACAATGGCTTCAACGGTTCAATCCCAGCTGGGTTTGGCTCTTTGCCCAATCTAACCTTTGTGGACTTGAGCAACAACAATTTCACAGGTCAAATCCCAGAAGATTTCGGCAATGCGATCAAATTACAGTACCTGAACATTTCTGGGAACTCCTTCAACAACCCATTACCAAACAACATTTGGAATGCCGTCAACCTTCAGATTTTCTCAGCAAGTTCTTCCAAAATCGTAGGTCATATCCCAGATTTCGATGGGTGCCAGAGCATTTACAGGATCGAATTACAGGGAAATTCACTAAACGGTTCCATCCCTTGGAAAATCAGCCACTGCCAAAAGCTTCTACTTCTGAATCTGAGCAGAAATTCTCTCACTGGCATCATCCCCTGGGAAATATCCGTCCTACCCTCCATCACCGACGTCGACCTCTCCCACAATTTCCTCACCGGAACCATACCCTCAAATTTCAACAACTGTACCACCCTCGAGAACTTCAACGTCTCCTTCAACCTTCTTACTGGACCCATTCCGTCTTCCGGGTCAATCTTCCCGAACCTGCATCCGTCTTCGTTCTCCGGCAACGAGGGCCTCTGCGGCGGGATTCTATCTAAGCCGTGTGCAGCTGACACGCTCGCCGCCGGCGACAACGAAGTGGAGCTTCAGAAGCAGCAGCCCAAGAGAACCGCCGGTGCAATTGTGTGGATTATAGCGGCAGCTTTCGGAATCGGGCTTTTCGTCCTCGTCGCTGGGACCCGCTGCTTTCACGCGAATTACAACCGTCGATTCAGTACCGACAGCCAAGAGATCGGACCGTGGAGATTAACCGCGTTTCAAAGGTTAAATTTCACGGCGGAGGATGTCCTAGAGTGCTTGTCGATGACCGACAAGATCTTAGGAATGGGGTCCACAGGGACGGTATACAAGGCAGAAATGCCAGGTGGCGAGATCATAGCCGTTAAGAAACTGTGGGGTAAACACAAAGACCACATCAGACGGCGAAGAGGGGTTTTGGCAGAAGTAGATGTGCTGGatggTGAGATGGAAGCAAGGGTGGCAGATTTTGGTGTGGCTAAATTGATTCAGAGTGATGAATCTATGTCTGTGATTGCTGGATCCTATGGCTACATTGCTCCGGAATATGCTTACACCCTTCAAGTTGACGAAAAGAGTGATATTTATAGTTATGGAGTGGTGTTGATGGAGATTCTAAGTGGAAAAAGATCGGTTGACCCTGAATTCGGTGATGGAAACAGTATTGTTGATTGGGTTaggttaaaaattaagagtaaagATGGGGTTGATGAGATATTAGATAAGAATTGCGGAGCAGGATGTGGTGCAGTGAAGGAGGAGATGCTACAAATGCTTAGAATTGCATTGCTCTGCACCAGCGGGAACCCTTCCGACCGGCCGTCGATGAGGGATGTTGTGTTGATGCTACAAGAAGCCCAGCCAAAGAGGAAATTGCTTGAAAGTGTGGTGGGGAGATGTGGTGGTCACAAtgttggtggtggtggtggtggtgataTTCTTTTGCCACAAAAGCCAACATTGGAAACCTA 2828 0.4402 MKPFLFSLFFFFFFFQTQIVFSATTLSLEILSLLALKNSIVDPHKFLHDWDPASTFTKSNYQDPVWCSWTGITCHSRTSQITNLDLSNRNLSGTIPPEIRYLSSLVHLNLSGNDFGGNLQAAIFQLSELRTLDISHNYFNSTFPPGISKLKFLTVFNAYSNNFIGPLPEEFIRLRFLEQLNLGGSYFSDRIPSGYGSFPRLKILYLAGNALEGPIPPQLGFLAQLERLEIGYNNFSGELPAELALLSNLKYLDISSANLSGRLRPELGNLTSLENLLLFKNHFTDQIPSTLGNLKVLKALDLSDNQLTGSIPQALGTLKELTKLSLMMNKLTGEIPQEFGDLPNLELFHLFNNSLSGFLPQKLGSNGLLQRLDVSTNSLSGPMPPTICNGNNVIKLILFNNKFQGLLPASLTKCSSLTRLRIQNNGFNGSIPAGFGSLPNLTFVDLSNNNFTGQIPEDFGNAIKLQYLNISGNSFNNPLPNNIWNAVNLQIFSASSSKIVGHIPDFDGCQSIYRIELQGNSLNGSIPWKISHCQKLLLLNLSRNSLTGIIPWEISVLPSITDVDLSHNFLTGTIPSNFNNCTTLENFNVSFNLLTGPIPSSGSIFPNLHPSSFSGNEGLCGGILSKPCAADTLAAGDNEVELQKQQPKRTAGAIVWIIAAAFGIGLFVLVAGTRCFHANYNRRFSTDSQEIGPWRLTAFQRLNFTAEDVLECLSMTDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKDHIRRRRGVLAEVDVLDGEMEARVADFGVAKLIQSDESMSVIAGSYGYIAPEYAYTLQVDEKSDIYSYGVVLMEILSGKRSVDPEFGDGNSIVDWVRLKIKSKDGVDEILDKNCGAGCGAVKEEMLQMLRIALLCTSGNPSDRPSMRDVVLMLQEAQPKRKLLESVVGRCGGHNVGGGGGGDILLPQKPTLET 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00870 942 Pfam Leucine rich repeat 272 331 IPR001611 GO:0005515
Bva07g00870 942 Pfam Leucine rich repeat 416 474 IPR001611 GO:0005515
Bva07g00870 942 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE TDR ISOFORM X3 3 765 - -
Bva07g00870 942 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE TDR ISOFORM X3 764 926 - -
Bva07g00870 942 ProSitePatterns Protein kinases ATP-binding region signature. 720 743 IPR017441 GO:0005524
Bva07g00870 942 Gene3D Phosphorylase Kinase; domain 1 694 766 - -
Bva07g00870 942 ProSiteProfiles Protein kinase domain profile. 512 912 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva07g00870 942 Pfam Leucine Rich Repeat 536 557 IPR001611 GO:0005515
Bva07g00870 942 SUPERFAMILY L domain-like 54 384 - -
Bva07g00870 942 SUPERFAMILY L domain-like 311 620 - -
Bva07g00870 942 SUPERFAMILY Protein kinase-like (PK-like) 717 907 IPR011009 -
Bva07g00870 942 Gene3D Transferase(Phosphotransferase) domain 1 767 909 - -
Bva07g00870 942 SMART LRR_typ_2 198 222 IPR003591 -
Bva07g00870 942 SMART LRR_typ_2 126 150 IPR003591 -
Bva07g00870 942 SMART LRR_typ_2 557 580 IPR003591 -
Bva07g00870 942 SMART LRR_typ_2 438 461 IPR003591 -
Bva07g00870 942 SMART LRR_typ_2 342 366 IPR003591 -
Bva07g00870 942 SMART LRR_typ_2 294 318 IPR003591 -
Bva07g00870 942 SMART LRR_typ_2 246 270 IPR003591 -
Bva07g00870 942 Gene3D Ribonuclease Inhibitor 194 287 IPR032675 -
Bva07g00870 942 Gene3D Ribonuclease Inhibitor 509 630 IPR032675 -
Bva07g00870 942 Gene3D Ribonuclease Inhibitor 28 193 IPR032675 -
Bva07g00870 942 Gene3D Ribonuclease Inhibitor 288 388 IPR032675 -
Bva07g00870 942 Gene3D Ribonuclease Inhibitor 389 508 IPR032675 -
Bva07g00870 942 Pfam Protein kinase domain 768 898 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva07g00870 942 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 3 765 - -
Bva07g00870 942 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 764 926 - -
Bva07g00870 942 Pfam Leucine rich repeat N-terminal domain 274 292 IPR013210 -
Bva07g00870 942 Pfam Leucine rich repeat N-terminal domain 30 74 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00870 Bva-Chr7 10637748 10641937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00870 764 917 Receptor kinase-like Gene Family AT1G08590 54.194 2.00e-49 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva07g00870 Pkinase 7.6e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00870 - - aprc:113866081 1353.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g00870 07 10637748 10641937 Bva07g00870 07 10637748 10641937 ECH