Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00858 ATGGACTTGAAGTCGAATCACACTCCTGTTCTCACCGATACAGTACCCATAACGAAGTCAAGACTGGGTGTGCATTCTAGTCTGTTGCCTTATTCCCCCACTGGGGCAACTATCCCGCATGGTCTGTTACTTTCAATTCCCAGGAAGAAGACGGGCATTCTTGGTGATGTTCGTTCTAGCGGATGGCTTGATGCCATGAAATCATCTTCTCCTTCGGCCAAGAAGATTACAAAGGATGTTCATGAGTTTGCATCACCTGACGCTGATGATGCTTACAGCACCTGGCTGCTGAGGTATCCATCAGCGCTTACATCTTTTGAGCAAATGACGAACCACGCAAAAGGCAAAAAAATAGCATTGTTTCTGGATTATGATGGAACTCTTTCACCAATTGTGGATGACCCTGACAGTGCTCTCATGTGTGATAATATGCGTGCTGCTGTTAGAAAGGCAGCAGAATACTTCCCAACGGCAATAATTAGTGGAAGAAGCCGTGACAAGGTATATGAATTTGTAGGAATAACAGAACTCTATTATGCGGGTAGTCATGGGATGGACATCATTAGTCCTGTCAGACAATCTGTATCTGACAACCACCCTAATTGCATTAGTTCCACTGACAAGCAGGGCAAGGAAGTTAATTTATTCCAACCTGCTGCTGAGTTCTTACCAATGATTGATGAGGTGTTTACATTGCTTGTTGAACGcacaaaagaaattgaaggagCAAAAGTTGagaacaacaaattttgtgTTTCTGTACATTACCGCAATGTACTTGAGAAGAATTGGGATACAGTGGGACAATGTGTCAATGAGCTTCTGGAGGACTATCCACGTTTACGTCTAACTCATGGTCGTAAGGTTTTAGAGATCCGACCTGTGATTGACTGGGATAAAGGGAAAGCAGTCACATTTCTTCTTGAATCACTAGGACTTAGAAATCGCGAAGATGTGCTCCCTATATATGTTGGAGATGACAGGACAGATGAAGATGCATTTAAGGTTTTGAGAGAGGAGACCAGAGGTTATGGCATCCTGGTGTCTTCTGCACCTAAGGAAAGCAATGCAGTTTACTCTCTTCGCGATCCATCAGAGGTGATGGAATTTCTCAAGTCACTTGTGGTATGCACTGCAAGCTCCCAAAATGGCCTCATATA 1160 0.425 MDLKSNHTPVLTDTVPITKSRLGVHSSLLPYSPTGATIPHGLLLSIPRKKTGILGDVRSSGWLDAMKSSSPSAKKITKDVHEFASPDADDAYSTWLLRYPSALTSFEQMTNHAKGKKIALFLDYDGTLSPIVDDPDSALMCDNMRAAVRKAAEYFPTAIISGRSRDKVYEFVGITELYYAGSHGMDIISPVRQSVSDNHPNCISSTDKQGKEVNLFQPAAEFLPMIDEVFTLLVERTKEIEGAKVENNKFCVSVHYRNVLEKNWDTVGQCVNELLEDYPRLRLTHGRKVLEIRPVIDWDKGKAVTFLLESLGLRNREDVLPIYVGDDRTDEDAFKVLREETRGYGILVSSAPKESNAVYSLRDPSEVMEFLKSLVVCTASSQNGLI 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00858 386 CDD HAD_TPP 119 369 - -
Bva07g00858 386 Pfam Trehalose-phosphatase 121 365 IPR003337 GO:0003824|GO:0005992
Bva07g00858 386 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 382 - -
Bva07g00858 386 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 120 338 IPR006379 -
Bva07g00858 386 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 382 IPR044651 GO:0004805|GO:0005992
Bva07g00858 386 Gene3D - 118 209 IPR023214 -
Bva07g00858 386 Gene3D - 227 384 IPR023214 -
Bva07g00858 386 SUPERFAMILY HAD-like 119 375 IPR036412 -
Bva07g00858 386 TIGRFAM T6PP: trehalose-phosphatase 115 375 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00858 Bva-Chr7 10558558 10564154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00858 112 374 Trehalose Biosynthesis Gene Families AT1G70290 26.056 6.97e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00858 K01087 - gmx:100819495 624.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g00858 07 10558558 10564154 Bva07g00858 07 10558558 10564154 ECH