Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva07g00855 | ATGTCCCAAGTGCAAGCGACCAGTGGAAGAAAACCAGGGTTGATTGCACGACTTGTAGTCCACCttgtaaatttgaattttgctgGGTTATGCCTTGGTGCTTGGTCAGACCATGGTGAAAGGACTGGTGGTTTCTATGCTTGCAATCGTTATGAGGCTGCTAAACAAGAAGGAGTGTATGATGAGGctgaaaggagaagagaaatggaaaaaattcCTTGGAGAGATATACTCGTTATTATGAGCAATGGGCCAGTAATCAATCTGCATGGACCTCCAACTTATTCATCGAGGCAAAAAGCTCTTGCAGATCCACACCAGATGCAGACCATGCATAGAGAGGCCTGGCTACAgGATTTCAGGCAGAATGGGGATGATGCCATTGTAGATATAGAAGTGAGGACTGGAGGAGCAAGAATTGGTGATTATGAATATCTGTTATCCATGCCCATGGGAACTCTGACAATTGAAAGTGTTGAGAAGCTCCTAgcacaaaaggaagaaaACCTCGATAGCAAGGGGACAGAAGAGGAAAGAAGGAGGTTAAGTGAAGCAAAGAAAAGGGCAACTAGTCGTGGGGTTACTCTAGCTGCTAAGAGGCCACCACGAAAGAATAGCAAGAAAGCCAACAATGTTTTGTCAGAAGCTTATATAGTGGCAAATTCTTCAATGGATAGAAAGTTGCAGAGGTTGTCAAACGGAAAGGTAGGGTTGGCTGTAGGAAAAGCTCCTCCTAAGAAGGATGATGAAGAAGGGCAATCTCTTCAAAATAAGGAGTACAACACTGTGAAGTCCTTGAGATATAGTCACTTGATGATTATGACGGATCAGGATTATGATGGTTCTCACATCAAAGGGCTGCTAATCAACTTCGTTCATTCTTTCTGGCCGCCATTGCCAAAAGTTCCATCTTTCTTAGTTGAATTCACCACTCCAATCATAAAGGGGCTTTTGGGGCAAGTTCTCGACAGGAAGGGAGAGAATACTCCCGCAACCTTGAGTCAGATGTTGATATA | 1016 | 0.4154 | MSQVQATSGRKPGLIARLVVHLVNLNFAGLCLGAWSDHGERTGGFYACNRYEAAKQEGVYDEAERRREMEKIPWRDILVIMSNGPVINLHGPPTYSSRQKALADPHQMQTMHREAWLQDFRQNGDDAIVDIEVRTGGARIGDYEYLLSMPMGTLTIESVEKLLAQKEENLDSKGTEEERRRLSEAKKRATSRGVTLAAKRPPRKNSKKANNVLSEAYIVANSSMDRKLQRLSNGKVGLAVGKAPPKKDDEEGQSLQNKEYNTVKSLRYSHLMIMTDQDYDGSHIKGLLINFVHSFWPPLPKVPSFLVEFTTPIIKGLLGQVLDRKGENTPATLSQMLI | 338 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva07g00855 | 338 | MobiDBLite | consensus disorder prediction | 169 | 188 | - | - | |
Bva07g00855 | 338 | Gene3D | - | 257 | 311 | IPR013759 | GO:0003677|GO:0003918|GO:0005524|GO:0006265 | |
Bva07g00855 | 338 | Coils | Coil | 156 | 192 | - | - | |
Bva07g00855 | 338 | MobiDBLite | consensus disorder prediction | 169 | 208 | - | - | |
Bva07g00855 | 338 | PANTHER | DNA TOPOISOMERASE 2 | 115 | 172 | - | - | |
Bva07g00855 | 338 | PANTHER | DNA TOPOISOMERASE 2 | 256 | 315 | - | - | |
Bva07g00855 | 338 | Gene3D | Topoisomerase, domain 3 | 88 | 191 | IPR013757 | GO:0003677|GO:0003918|GO:0005524 | |
Bva07g00855 | 338 | PANTHER | DNA TOPOISOMERASE/GYRASE | 256 | 315 | - | - | |
Bva07g00855 | 338 | Gene3D | - | 24 | 75 | - | - | |
Bva07g00855 | 338 | PRINTS | DNA topoisomerase II family signature | 304 | 316 | - | - | |
Bva07g00855 | 338 | PRINTS | DNA topoisomerase II family signature | 283 | 300 | - | - | |
Bva07g00855 | 338 | PRINTS | DNA topoisomerase II family signature | 265 | 281 | - | - | |
Bva07g00855 | 338 | SUPERFAMILY | Type II DNA topoisomerase | 257 | 320 | IPR013760 | GO:0003918|GO:0005524 | |
Bva07g00855 | 338 | PRINTS | Topoisomerase II signature | 284 | 299 | IPR001154 | GO:0003677|GO:0003918|GO:0005524|GO:0006265 | |
Bva07g00855 | 338 | PRINTS | Topoisomerase II signature | 305 | 316 | IPR001154 | GO:0003677|GO:0003918|GO:0005524|GO:0006265 | |
Bva07g00855 | 338 | PANTHER | DNA TOPOISOMERASE/GYRASE | 115 | 172 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva07g00855 | Bva-Chr7 | 10538032 | 10542409 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva07g00855 | 23 | 110 | ARIADNE family | AT1G05890 | 52.174 | 6.22e-21 | 92.0 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva07g00855 | K03164 | - | gmx:100787008 | 111.694 |