Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00855 ATGTCCCAAGTGCAAGCGACCAGTGGAAGAAAACCAGGGTTGATTGCACGACTTGTAGTCCACCttgtaaatttgaattttgctgGGTTATGCCTTGGTGCTTGGTCAGACCATGGTGAAAGGACTGGTGGTTTCTATGCTTGCAATCGTTATGAGGCTGCTAAACAAGAAGGAGTGTATGATGAGGctgaaaggagaagagaaatggaaaaaattcCTTGGAGAGATATACTCGTTATTATGAGCAATGGGCCAGTAATCAATCTGCATGGACCTCCAACTTATTCATCGAGGCAAAAAGCTCTTGCAGATCCACACCAGATGCAGACCATGCATAGAGAGGCCTGGCTACAgGATTTCAGGCAGAATGGGGATGATGCCATTGTAGATATAGAAGTGAGGACTGGAGGAGCAAGAATTGGTGATTATGAATATCTGTTATCCATGCCCATGGGAACTCTGACAATTGAAAGTGTTGAGAAGCTCCTAgcacaaaaggaagaaaACCTCGATAGCAAGGGGACAGAAGAGGAAAGAAGGAGGTTAAGTGAAGCAAAGAAAAGGGCAACTAGTCGTGGGGTTACTCTAGCTGCTAAGAGGCCACCACGAAAGAATAGCAAGAAAGCCAACAATGTTTTGTCAGAAGCTTATATAGTGGCAAATTCTTCAATGGATAGAAAGTTGCAGAGGTTGTCAAACGGAAAGGTAGGGTTGGCTGTAGGAAAAGCTCCTCCTAAGAAGGATGATGAAGAAGGGCAATCTCTTCAAAATAAGGAGTACAACACTGTGAAGTCCTTGAGATATAGTCACTTGATGATTATGACGGATCAGGATTATGATGGTTCTCACATCAAAGGGCTGCTAATCAACTTCGTTCATTCTTTCTGGCCGCCATTGCCAAAAGTTCCATCTTTCTTAGTTGAATTCACCACTCCAATCATAAAGGGGCTTTTGGGGCAAGTTCTCGACAGGAAGGGAGAGAATACTCCCGCAACCTTGAGTCAGATGTTGATATA 1016 0.4154 MSQVQATSGRKPGLIARLVVHLVNLNFAGLCLGAWSDHGERTGGFYACNRYEAAKQEGVYDEAERRREMEKIPWRDILVIMSNGPVINLHGPPTYSSRQKALADPHQMQTMHREAWLQDFRQNGDDAIVDIEVRTGGARIGDYEYLLSMPMGTLTIESVEKLLAQKEENLDSKGTEEERRRLSEAKKRATSRGVTLAAKRPPRKNSKKANNVLSEAYIVANSSMDRKLQRLSNGKVGLAVGKAPPKKDDEEGQSLQNKEYNTVKSLRYSHLMIMTDQDYDGSHIKGLLINFVHSFWPPLPKVPSFLVEFTTPIIKGLLGQVLDRKGENTPATLSQMLI 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00855 338 MobiDBLite consensus disorder prediction 169 188 - -
Bva07g00855 338 Gene3D - 257 311 IPR013759 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Bva07g00855 338 Coils Coil 156 192 - -
Bva07g00855 338 MobiDBLite consensus disorder prediction 169 208 - -
Bva07g00855 338 PANTHER DNA TOPOISOMERASE 2 115 172 - -
Bva07g00855 338 PANTHER DNA TOPOISOMERASE 2 256 315 - -
Bva07g00855 338 Gene3D Topoisomerase, domain 3 88 191 IPR013757 GO:0003677|GO:0003918|GO:0005524
Bva07g00855 338 PANTHER DNA TOPOISOMERASE/GYRASE 256 315 - -
Bva07g00855 338 Gene3D - 24 75 - -
Bva07g00855 338 PRINTS DNA topoisomerase II family signature 304 316 - -
Bva07g00855 338 PRINTS DNA topoisomerase II family signature 283 300 - -
Bva07g00855 338 PRINTS DNA topoisomerase II family signature 265 281 - -
Bva07g00855 338 SUPERFAMILY Type II DNA topoisomerase 257 320 IPR013760 GO:0003918|GO:0005524
Bva07g00855 338 PRINTS Topoisomerase II signature 284 299 IPR001154 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Bva07g00855 338 PRINTS Topoisomerase II signature 305 316 IPR001154 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Bva07g00855 338 PANTHER DNA TOPOISOMERASE/GYRASE 115 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00855 Bva-Chr7 10538032 10542409 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00855 23 110 ARIADNE family AT1G05890 52.174 6.22e-21 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00855 K03164 - gmx:100787008 111.694