Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00853 ATGCCTCCAACGTCTATGTGGTTGAAGGATCTGGATGAGCTTGAGAAGAAACTTGATGTAGACCTAGATAGCAAGGAGGCAGAGGAGGAAAGAAGGAGGTTAAGTGAAGCAAAGAAAAGGGCAACTAGTCGTGGGGTTACTCTAGCTGCTAAGAGGCCACCACAAAAGAATAACAAGAGAGCCAACAATGTTGAGTCAGAAGCTTATATGGTGGCACATTCTTCAATGGATGTTGCTAAGCATGGATTATTAGTTATAATCTATATTTCAGAAATATTACGATCGAGGCAAAAAGCTCTTGCAGATCTACACCAGATGCAGACCGTGCATATTGAGAAGCTTAGTGTCACACAGTGCCAACCTGAGTCACAGCTTAAGTTCATAAACAGAGAGAGGCCTGGCTACAgATTTCAGGCAGAATGGGGATG 428 0.4322 MPPTSMWLKDLDELEKKLDVDLDSKEAEEERRRLSEAKKRATSRGVTLAAKRPPQKNNKRANNVESEAYMVAHSSMDVAKHGLLVIIYISEILRSRQKALADLHQMQTVHIEKLSVTQCQPESQLKFINRERPGYRFQAEWG 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00853 142 MobiDBLite consensus disorder prediction 21 63 - -
Bva07g00853 142 Coils Coil 8 44 - -
Bva07g00853 142 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 94 129 - -
Bva07g00853 142 MobiDBLite consensus disorder prediction 21 40 - -
Bva07g00853 142 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 94 129 IPR031127 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00853 Bva-Chr7 10532454 10536143 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00853 95 128 ARIADNE family AT1G65430 79.412 3.92e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00853 K11968 - gmx:100810427 67.781