Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00844 ATGGCTACGAATCTTTGCCTAATCATGTTCcttctttccttgttttctttgtccTCTCCAGCACTTTCAAGCATTTTCTCCAATGCTATTGATTCTTGGTGTAACAAAACCCCACACCCTGCAACATGCAAGCACTATGCTAGAAGCCATAATCTACAAAATGGTTTCAAAAGTGATTCTCAGTTCAAGAAATTCTTCCTCAGAGTTGCTGCGGATCAATCTCTTAAAGCCGAAAGTCAAAACAAGTGGCTCGGTAGGAGAAGCCGAAATAGGCATGAAAGGACTGCATGGAACGATTGTTTGAAGCTTTACCAAGACACCTTCATTACCCTCAACCAAACCCTAGACCCTACCTTAAAGTCCACGGATTATGATGTCCAAACCTGGCTCAGCACTGCTCTCACCAACATTGACACATGCAGAACCGGGTTCGTGGAGGTCGGTGTCAAGAACAATATCCTTCCTCTCTTGCCCAACAAGAATCTATCTGATGTGATAAGCAATGCATTGGCACTCAACAATGGTTCCACGGCTCCGGCAGTGTCTAACAGTTACAAAGAGGGTTTCCCAAACTGGCTTTCTGCAGGTGATAGGAAGCTGTTGCAGTCATCATCGCCCACACCGGATGTTGTGGTGGCGAAAGACGGATCGGGGGATTATAAGACGATAAAAGAAGCTCTTGCAGTTGCTTCAAAGAGGAGTGGCACTAAGAGGTTTGTGGTATATGTGAAACCAGGTATATACGAAGAGAACCTTGATATTGGCAAGAGTTTGAAGAATATTATGATGTATAGTGATAGCATGAGGTTTGCAGTCATAACCGGTAGCCGAAGTGTTGTGGGAGGTTCCACCACTTTCAACTCTGCAACTGTTGCCGTTACTGGAGATGGATTCATTGCCCGTGGCATCACATTCCGTAACACAGCTGGACCACAAAACCATCAAGCCGTGGCGCTACGTTCTGGTGCTGATCTCTCAGTTTTCTTTCGTTGTGGCTTTGAAGGCTACCAAGACACTCTCTACGTTCACTCCCAAAGACAATTCTACAAAGAATGTTACATTTATGGCACTGTTGACTTCATCTTTGGCAATGCTGCTGTTGTCTTCCAAAACTGCATGATCTATGCAAGGAGGCCAATGGACAACCAGAAAAACACTGTAACAGCTCAAGGCAGAAGTGATCCCAATCAGAACACTGGCATCATCATCCACAACTCTCGTGTCATGGCAGCTCCGGACCTTGTCCCTGTTCTAAGCTCCTTCCAAACTTTCTTGGGTCGTCCATGGAAGGAATATTCAGTAACTGTATTCATGAAGACTTACCTAGATACCTTGGTAGACCCTGCGGGGTGGTTAGAGTGGAATGGCGATTTTGCCCTTAACACTTTGTATTATGGTGAGTATAGGAACCTTGGACCACGAGCTTCTACGAGCAATAGGGTTAATTGGCGTGGTTACCATGTTATAACAAGTGAAACAGAAGCATCAAAATTCACTGTTGAGAATTTCATTGCTGGGAACTCATGGTTGCCTGCTACAGGCATACCTTTCTATCCCAACCTCTG 1565 0.4447 MATNLCLIMFLLSLFSLSSPALSSIFSNAIDSWCNKTPHPATCKHYARSHNLQNGFKSDSQFKKFFLRVAADQSLKAESQNKWLGRRSRNRHERTAWNDCLKLYQDTFITLNQTLDPTLKSTDYDVQTWLSTALTNIDTCRTGFVEVGVKNNILPLLPNKNLSDVISNALALNNGSTAPAVSNSYKEGFPNWLSAGDRKLLQSSSPTPDVVVAKDGSGDYKTIKEALAVASKRSGTKRFVVYVKPGIYEENLDIGKSLKNIMMYSDSMRFAVITGSRSVVGGSTTFNSATVAVTGDGFIARGITFRNTAGPQNHQAVALRSGADLSVFFRCGFEGYQDTLYVHSQRQFYKECYIYGTVDFIFGNAAVVFQNCMIYARRPMDNQKNTVTAQGRSDPNQNTGIIIHNSRVMAAPDLVPVLSSFQTFLGRPWKEYSVTVFMKTYLDTLVDPAGWLEWNGDFALNTLYYGEYRNLGPRASTSNRVNWRGYHVITSETEASKFTVENFIAGNSWLPATGIPFYPNL 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00844 521 Pfam Plant invertase/pectin methylesterase inhibitor 29 172 IPR006501 GO:0004857
Bva07g00844 521 PANTHER PECTINESTERASE 7 518 - -
Bva07g00844 521 SUPERFAMILY Pectin lyase-like 205 519 IPR011050 -
Bva07g00844 521 CDD PMEI-like_3 32 174 - -
Bva07g00844 521 Gene3D - 203 521 IPR012334 -
Bva07g00844 521 PANTHER PECTINESTERASE 7 518 - -
Bva07g00844 521 SMART PMEI_2 25 172 IPR006501 GO:0004857
Bva07g00844 521 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 27 174 IPR035513 -
Bva07g00844 521 ProSitePatterns Pectinesterase signature 2. 354 363 IPR033131 -
Bva07g00844 521 Gene3D Invertase/pectin methylesterase inhibitor family protein 24 175 IPR035513 -
Bva07g00844 521 Pfam Pectinesterase 209 507 IPR000070 GO:0030599|GO:0042545
Bva07g00844 521 TIGRFAM PME_inhib: pectinesterase inhibitor domain 1 174 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00844 Bva-Chr7 10427987 10429882 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00844 1 521 Carbohydrate Esterase AT2G45220 56.298 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00844 K01051 - gmx:100776412 756.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g00844 07 10427987 10429882 Bva07g00844 07 10427987 10429882 ECH