Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00843 atggCTGCTAGACTATTCCtcactttaattttcttctcttcattctTCTTCTCAATAGCCTTGTCCAGAAAATCATCTTCCTCCAGTAACATAAACTGGTGGTGCAACCGAACCCCACACCCTGGCCCATGCAAGTACTACATAAGGCACAGCCACCACCATTTCCGGCCGAAGCACCGGTCCGAATTCCGGCAAATGCTCACTCAATTGGCATTAGAACAAGCATTCACCACGCAGAAGAGCATCCACGGCTATGAAACAATTTGCAAAacgaagaataagaaaattgtaTTCACCGACTGTGTAAAACTCTATGAAAATACCATTTTCCATCTAAACCGAACCCTTCAAGGCCTACGCAAGAAAAGCTGCTCAACCTTTGATGCACAGACATGGCTCAGCACTGCTCTCACAAACCTAGAAACATGTTCAACCGGTGCCTTGGAGCTGAGGGTTACAGATTTCATGCCACCTTTGATATACGGCAACGTTTCGGAGATGATAAGGAATAGCTTAGCCATGAATGGGTATCTCTTGAAACTAGAACAAGCGAGAAATTATAATTGCTCGGAAGTAACAGATGATGTGTTTCCAAGTTGGGTTTCAGGGAGTGAGAGGAAGCTGTTGCAGGGTGCTTCTTCCATTAGGGCTAATCTTGTGGTGGCCAAAGATGGTTCTGGGCATTTCAGGACAGTGCAAGCTGCCATTAATGCAGCGGCGAGGAGGAGAATCAAGAGCAGATTTGTGATACATGTGAAGAGAGGAGTTTATAGAGAAAACATTCAGGTTGATAAGTTCAACGATAACATCATGCTGGTTGGTGATGGGATGAGATATACCATAATCTCAGGTAGAAGGAGCGTTCAAGATGGATTTACAACCTATAGCTCTGCAACAGCTGGCATAGATGGGCTTCACTTCATTGCACGTGACATTACCTTCCAAAACACCGCCGGTCCTCTCAAGGGGCAAGCGGTGGCGCTCCGGTCGGCGTCAGACCTCTCCGTCTTCTACCGCTGCGCCATCGTAGGTTACCAAGACACTCTGATGGTCCACGCACAACGGCAATTTTACAGAGAATGCTACATCTATGGCACCATAGATTTCATCTTTGGCAATGCTGCTGTTGTTTTCCAAAATTGTATGATTTATGCAAGAAGACCATTACCGGGCCAAGCAAATATGATAACGGCCCAAGGCCGGGCCGACCCATTTCAAAACACGGGAATTTCAATCCACAACTCTCAAATCCGGGCCGCCCCGGATCTCAAGCCCGTTGTTGGGGTTTTCAAAACCTACTTGGGGCGGCCATGGCAACAATATTCCAGAGTGATGGTCATGAAAACATTCATCGACAGTGTGATGAGCCCGTTGGGCTGGTCCCCATGGGGCAACAGTAATTTTGCTCTCAACACGTTGTACTATGCAGAGTATAGGAACTTTGGGCCCGGTTCATCAACAAGAAACCGGGTACGGTGGCCCGGGTTTCATGTCATAGCCCGCCCGAGTCAGGCTGCGCCCTTCACTGTTTCTGGCCTCCTAGGGGGTCGCACATGGTTGCCAGCTGCCGGGGTGCCCTTCACATTAGGGGTTTG 1595 0.4721 MAARLFLTLIFFSSFFFSIALSRKSSSSSNINWWCNRTPHPGPCKYYIRHSHHHFRPKHRSEFRQMLTQLALEQAFTTQKSIHGYETICKTKNKKIVFTDCVKLYENTIFHLNRTLQGLRKKSCSTFDAQTWLSTALTNLETCSTGALELRVTDFMPPLIYGNVSEMIRNSLAMNGYLLKLEQARNYNCSEVTDDVFPSWVSGSERKLLQGASSIRANLVVAKDGSGHFRTVQAAINAAARRRIKSRFVIHVKRGVYRENIQVDKFNDNIMLVGDGMRYTIISGRRSVQDGFTTYSSATAGIDGLHFIARDITFQNTAGPLKGQAVALRSASDLSVFYRCAIVGYQDTLMVHAQRQFYRECYIYGTIDFIFGNAAVVFQNCMIYARRPLPGQANMITAQGRADPFQNTGISIHNSQIRAAPDLKPVVGVFKTYLGRPWQQYSRVMVMKTFIDSVMSPLGWSPWGNSNFALNTLYYAEYRNFGPGSSTRNRVRWPGFHVIARPSQAAPFTVSGLLGGRTWLPAAGVPFTLGV 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00843 531 PANTHER PECTINESTERASE 5 530 - -
Bva07g00843 531 ProSitePatterns Pectinesterase signature 2. 363 372 IPR033131 -
Bva07g00843 531 Gene3D Invertase/pectin methylesterase inhibitor family protein 25 178 IPR035513 -
Bva07g00843 531 Pfam Pectinesterase 218 516 IPR000070 GO:0030599|GO:0042545
Bva07g00843 531 PANTHER PECTINESTERASE 5 530 - -
Bva07g00843 531 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 29 179 IPR035513 -
Bva07g00843 531 TIGRFAM PME_inhib: pectinesterase inhibitor domain 4 176 IPR006501 GO:0004857
Bva07g00843 531 SUPERFAMILY Pectin lyase-like 215 530 IPR011050 -
Bva07g00843 531 CDD PMEI-like_3 33 180 - -
Bva07g00843 531 Gene3D - 212 531 IPR012334 -
Bva07g00843 531 SMART PMEI_2 26 174 IPR006501 GO:0004857
Bva07g00843 531 Pfam Plant invertase/pectin methylesterase inhibitor 30 174 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00843 Bva-Chr7 10422322 10424681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00843 27 528 Carbohydrate Esterase AT5G51500 61.569 0.0 638
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00843 K01051 - gmx:100807908 753.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g00843 07 10422322 10424681 Bva07g00843 07 10422322 10424681 ECH