Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00835 atggAGGCAAAGCTCTTTACATCCCTTCTCATCTTATTATCCTCCAGCTTCATCTTATACCCACCCATTGCAGCCAGAGCCACTGGAAAACCATACCAAGAAACCAGTACCAAATTCATCAGAAAAACTTGTAGTGCCACAAGATACCCAAGACTCTGCTTTAGCTCTCTAGTAAAGCACGCCACCTTCATCCAAACAAACCGTATGCATCTAACTGATACAGCCCTTAATGTCACCCTTTCTTCAGCAAAAGGAGCTTCTGCTTTGATATTGAATCTTTCTAAGAGCCATGGTTTGAAGCCAAGGGAGGTTGCAGCCATTAATGACTGTGTGGAGGTGCTTAGTGATTCTGTCTATGAACTCCGAAGATCTATCAAAGAAATGTCTCATCTCAGAAgctccaatttttatttaacaatcaGTGATGTGCAAACTTGGGTTAGTGCTGCTTTGACAGATGAGAATACGTGCATGGATGGGTTCCAAGGCACTCATGGAAAGGTTAAGAAGAGAGTCAGAAGGGAAATTGTGGTGGCTGCACAGTTGACAAGCAATGCCTTGGCTTTGATAAATCAACTAGCTTCTTA 587 0.4123 MEAKLFTSLLILLSSSFILYPPIAARATGKPYQETSTKFIRKTCSATRYPRLCFSSLVKHATFIQTNRMHLTDTALNVTLSSAKGASALILNLSKSHGLKPREVAAINDCVEVLSDSVYELRRSIKEMSHLRSSNFYLTISDVQTWVSAALTDENTCMDGFQGTHGKVKKRVRREIVVAAQLTSNALALINQLAS 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00835 195 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 194 IPR035513 -
Bva07g00835 195 Pfam Plant invertase/pectin methylesterase inhibitor 38 189 IPR006501 GO:0004857
Bva07g00835 195 PANTHER PECTINESTERASE INHIBITOR-LIKE 20 193 - -
Bva07g00835 195 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 193 IPR035513 -
Bva07g00835 195 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 193 IPR006501 GO:0004857
Bva07g00835 195 CDD PMEI-like_3 44 195 - -
Bva07g00835 195 SMART PMEI_2 35 189 IPR006501 GO:0004857
Bva07g00835 195 PANTHER 21 KDA PROTEIN-LIKE 20 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00835 Bva-Chr7 10363624 10364465 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00835 40 193 Carbohydrate Esterase AT3G14310 31.056 2.70e-21 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00835 - - gmx:100305537 213.386
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g00835 07 10363624 10364465 Bva07g00835 07 10363624 10364465 ECH