Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00801 ATGCCCTTTTCTCATAGTGATTTTACAAGTTTTTCATATTCCGAATTAAACCTGAACCTGATTGCTCCGGGACAAAAACCTATTTCCTCCTCACCCACTTCGTCTACAACTTCGTCgacctcttcttcttcatctgtaGCATCCCCTGCTTCCAGCTGCTCAAGACAGTCACTAATGGAGGCCGCATCTGCAATTTCCGAAGGGAAAACAGAAGCTGCCTTGGAGATCCTTGCTCGTTTGTCACATGTTTCAAACCCAAATGGGAATTCGGATCAGAGATTGACAGATTGCATGGTGTCGACTCTGAGATCGCGGCTGTCTTACACGGGCTGTCTTCGCGCCAGAATGGGAAACCAGCCACGGTG 365 0.4548 MPFSHSDFTSFSYSELNLNLIAPGQKPISSSPTSSTTSSTSSSSSVASPASSCSRQSLMEAASAISEGKTEAALEILARLSHVSNPNGNSDQRLTDCMVSTLRSRLSYTGCLRARMGNQPR 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00801 121 Pfam GRAS domain family 55 108 IPR005202 -
Bva07g00801 121 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 25 107 IPR005202 -
Bva07g00801 121 ProSiteProfiles GRAS family profile. 45 121 IPR005202 -
Bva07g00801 121 MobiDBLite consensus disorder prediction 24 52 - -
Bva07g00801 121 PANTHER SCARECROW-LIKE PROTEIN 8 25 107 IPR030013 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00801 Bva-Chr7 9924492 9925677 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00801 53 107 GRAS Transcription Factor Family AT5G52510 58.182 3.81e-15 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva07g00801 GRAS 5.2e-09 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00801 - - aip:107644872 100.908