Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00739 atGGATCGGGCTAGAGGGCAAGGAAATGGGGTGGAATTGGATCCTGTTGATGAAgggatagaaaagaaattgagcCATTCTGTTGAAGAGGTTGCAGCAACCGGGGACAAATTGGGTGAGAGTGCTGGTATGAGTGGAGAGGATGGGACTTCAAAGGAGATGGATAAGGATCTGGGATCAAATAAGGAACTGAAGGAGGGACCTGAAGAACTTACGGATCAGGACATGCATGATCAGCTGAACAGTGAGACATTGCATGAAGTTGATCAAGGAACTAGTTACACTTTCAGAAATTTGGTTAACGGAGAAGTAGTTGAGACTGTGGTTGTAATAGATTCTTCTGGGTCAGATAATGTGAGCGGAGAAAACAGGAAATTGGAAGGAAAAGCTAATGAATCAGGGTTGAGCAAGGTATCTGTGAAAGCACCAAAAGAGGTGTCTGAAAGAGATAACAATTCGTGTGTGATTGATATAAAGTGCAGCAGCTACAAAGGTTTTAGTGAGAATTTGGATGGTGAAAGAATTTGCAGGATTTGTCATCTGGCTTCTGGGCAACCATCAGATACAACATCTGTTAGCTCTACTAATGATGCTACGAATTCAGAATTGATTCAGCTCGGTTGCGCTTGTAAAGATGAGCTAGGCATTGCCCACAGTCATTGTGCCGAGGCGTGGTTCAATCTTAAAGGAAACAGATTATGTGAAATATGTGGTGAGACTGCCAAAAATGTTACGGGTGCCATCGATAACGGTTTCATGGAAGAGTGGAACGAAAGAAGATTCCTTGACAGCGGTGCTACCTCGTCAGGCAGGTTTCGCGGATGCTTGCGTGGACAGCCTTTCTGTAACTTCTTGATGGCATGCCTGGTTATCGCTTTCGTCCTGCCATGGTTCTTCCGTGTAAATATGTTCTA 914 0.4333 MDRARGQGNGVELDPVDEGIEKKLSHSVEEVAATGDKLGESAGMSGEDGTSKEMDKDLGSNKELKEGPEELTDQDMHDQLNSETLHEVDQGTSYTFRNLVNGEVVETVVVIDSSGSDNVSGENRKLEGKANESGLSKVSVKAPKEVSERDNNSCVIDIKCSSYKGFSENLDGERICRICHLASGQPSDTTSVSSTNDATNSELIQLGCACKDELGIAHSHCAEAWFNLKGNRLCEICGETAKNVTGAIDNGFMEEWNERRFLDSGATSSGRFRGCLRGQPFCNFLMACLVIAFVLPWFFRVNMF 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00739 304 PANTHER E3 UBIQUITIN-PROTEIN LIGASE MARCH-RELATED 1 304 - -
Bva07g00739 304 MobiDBLite consensus disorder prediction 49 74 - -
Bva07g00739 304 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 160 248 IPR013083 -
Bva07g00739 304 MobiDBLite consensus disorder prediction 1 74 - -
Bva07g00739 304 ProSiteProfiles Zinc finger RING-CH-type profile. 168 244 IPR011016 GO:0008270
Bva07g00739 304 MobiDBLite consensus disorder prediction 15 30 - -
Bva07g00739 304 MobiDBLite consensus disorder prediction 115 142 - -
Bva07g00739 304 Pfam RING-variant domain 176 237 IPR011016 GO:0008270
Bva07g00739 304 SUPERFAMILY RING/U-box 173 240 - -
Bva07g00739 304 PANTHER ZINC FINGER, RING-CH-TYPE 1 304 - -
Bva07g00739 304 SMART ringv_2 175 238 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00739 Bva-Chr7 9250690 9253579 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00739 103 303 C3H Transcription Factor Family AT5G05830 35.185 7.43e-30 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00739 - - gmx:100791129 385.185