Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00725 ATGGGAGCACCAACTAATGCAAGCCGTGGCGGCCGGAAAAAGCCATCATCCAGAGGCCACCACAAGTTCGTCGGAGTCCGTCAACGCCCCTCCGGAAGATGGGTTGCAGAGATCAAGGACTCTCTTCAGAAGGTTAGACTCTGGCTTGGAACATTTGACACTGCCGAGGATGCAGCTCGTGCCTATGACGCTGCTGCTCGCGCTCTGCGTGGCCCCACTGCTCGTACCAACTTCGAGTTGCCGGAGCCTTCAGCCACCGGAGGCGGTGGTGCTAGGCGCGGTGGCCGCTCACACTACATGCCGGATTGTATTGAGCCCTTTTCATTTGAGGAAGTCTGTGAGCCAGGAGCAGATGCTGATGGCCTTCTTGGTGCACTCAAGGCCAAACTGTTTGATGAAAAAGGTGTCAAGCTTCCCtcacctctttctctttctctttcatcaTCTGGTATTGTTTCAGGTTCAACTAGCAACCTTTCAGGGAATAATAAGAAAgactcatcatcatcatcatcagctGCCGCTGCTTCTGCCCTTATGGCTGCAGGAACCAGAAACCCTACTTTGGGTCTCACAAGCATTTCATCAAAGAGTTCTTCTAAGAGTACTGTGCTTGTCTCAGATCATAATTATGGAAATGTTATAGCAGGCAATGGTGGATTGAATCTGAATTCTCATCAACCAAGCCAAGTCATGCCCATAACAAGCATGATGACTAATTGGTCCAATGAAATGGATTATGACCAATTGGCTTGGCCTCCACAGATGAGCATGGTTCCTCAAAGTGGAACCTTTTCCTCTTTGAGTGTAGTAACATCTACATGGCCTTTATCTGGGCTAACTGATCAGTCTACTGGTGCTATTGGTATGACATATTCAGATCAATTGCCATCAACTGGGACTCGTAAGAGCACTGGCAAAGCAGTGGATATGATAAATATGCAATTCCCACAAATTGGTGCCGAAGGGTTTTGGGTACCTGATCAGCAACAGCAGTTTGTGCACTGTGAGAATAATAATTGGTTATCTGCTTCTAATGGGAATTGGGATCCTTTGATCTATATGCCTTCTGACTTGGGTTA 1082 0.4575 MGAPTNASRGGRKKPSSRGHHKFVGVRQRPSGRWVAEIKDSLQKVRLWLGTFDTAEDAARAYDAAARALRGPTARTNFELPEPSATGGGGARRGGRSHYMPDCIEPFSFEEVCEPGADADGLLGALKAKLFDEKGVKLPSPLSLSLSSSGIVSGSTSNLSGNNKKDSSSSSSAAAASALMAAGTRNPTLGLTSISSKSSSKSTVLVSDHNYGNVIAGNGGLNLNSHQPSQVMPITSMMTNWSNEMDYDQLAWPPQMSMVPQSGTFSSLSVVTSTWPLSGLTDQSTGAIGMTYSDQLPSTGTRKSTGKAVDMINMQFPQIGAEGFWVPDQQQQFVHCENNNWLSASNGNWDPLIYMPSDLG 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00725 360 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR LEP 3 355 - -
Bva07g00725 360 MobiDBLite consensus disorder prediction 13 27 - -
Bva07g00725 360 Gene3D AP2/ERF domain 21 80 IPR036955 GO:0003700|GO:0006355
Bva07g00725 360 MobiDBLite consensus disorder prediction 146 171 - -
Bva07g00725 360 ProSiteProfiles AP2/ERF domain profile. 22 79 IPR001471 GO:0003700|GO:0006355
Bva07g00725 360 SUPERFAMILY DNA-binding domain 22 79 IPR016177 GO:0003677
Bva07g00725 360 CDD AP2 22 79 IPR001471 GO:0003700|GO:0006355
Bva07g00725 360 PRINTS Ethylene responsive element binding protein signature 23 34 IPR001471 GO:0003700|GO:0006355
Bva07g00725 360 PRINTS Ethylene responsive element binding protein signature 45 61 IPR001471 GO:0003700|GO:0006355
Bva07g00725 360 Pfam AP2 domain 22 71 IPR001471 GO:0003700|GO:0006355
Bva07g00725 360 SMART rav1_2 22 85 IPR001471 GO:0003700|GO:0006355
Bva07g00725 360 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 3 355 - -
Bva07g00725 360 MobiDBLite consensus disorder prediction 75 97 - -
Bva07g00725 360 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00725 Bva-Chr7 9185862 9186944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00725 12 78 AP2-EREBP Transcription Factor Family AT5G19790 69.118 1.63e-25 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva07g00725 AP2 5.6e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00725 - - gmx:102661478 280.796