Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00670 ATGGATGAAGGACAAGGCAGTTCAAGTTCCTTGCCTCCTTTCCTTACGAAGACTTATGAGATGGTGGATGATCCTTCCTCAGATTCAGTTGTTTCCTGGAGTGCCTCTAATAGAAGTTTCATTGTATGGAATCCACCAGAATTTTCGAGGGATTTGCTTCCTAGATTCTTTAAGCACAATAACTTCTCCAGTTTCATTCGGCAGCTCAACACATATGGTTTTAGAAAAGTCGACCCAGAACAATGGGAATTTGCCAATGAAGATTTTGTTAGAGGTCGACCACAACTTTTGAAGAATATCCATAGAAGAAAGCCTGTTCATAGCCATTCTTTACAGAATCTCCATGGACAAACACAGGGAGCATCTTCATTGACTGATTCAGAAAGGCAGaatttaaaagatgaaatagAGAGGATTAAACAGGAGAAAGAACGGCTTCGTCTAGAGTTACAGAGACATGAAGAGGAGTGGCAAGTGTATGAGGTACAAATGCGATGCTCCAAAGAGCGATTGTCACAACTGGAACAGAATCAACAAAAGATGATCTCTTCTATCTCTGAAGTGTTGCCAAAACCTGGGATTGCCTTAAATCTTTTGCCGCTTTCAGAAACACTGGAGAGAAAACGAAGGTTGCCAAGAAGTAGTTACTTCTGTAATGATGCTTGCGATGAGGACACTATTGGAGCTTCCCAAATGCTAGCTAGAGAGAATTCAGAGAGCAGCTCTCCTTTTACCATAAACATGGCGCGATTTGATCAGTTGGAATCATCCCTGGTTTTTTGGGAGAATATTGCACATGATGTTGATGACACCCTTGTTCAAAATTGTGCAAACATGGAATTTGATGAATCTACATGTTGTGATGATAGTCCAACTATTTCTTCTGTGCAACTTGATGTTGAAGATCAGTCTAAGTCATCAGGAATTGACATGAACTCTGAGCCTGCTGCAACTACTGCTCCTGAGCCAAGTGCATCACAAGAACAACCTGTGGGAAATACCACTGTGACAACTGGTGTTAATGATGTATTCTGGGAACAATTCTTGACCGAGAATCCCGGTTCATCTGAAACACAGGAAGCCCAGTCGGAGAGAAAGGGTTCTGATGTCCAAATGAATGAAGGAAAAACTACTGATCGTGGCAAATTTTGGTGGAATATGAGGAATGTAAATAACCTTCCAGAGCAGATGGGGCATCTTAGTCAAGCAGAGAAAACATA 1220 0.4115 MDEGQGSSSSLPPFLTKTYEMVDDPSSDSVVSWSASNRSFIVWNPPEFSRDLLPRFFKHNNFSSFIRQLNTYGFRKVDPEQWEFANEDFVRGRPQLLKNIHRRKPVHSHSLQNLHGQTQGASSLTDSERQNLKDEIERIKQEKERLRLELQRHEEEWQVYEVQMRCSKERLSQLEQNQQKMISSISEVLPKPGIALNLLPLSETLERKRRLPRSSYFCNDACDEDTIGASQMLARENSESSSPFTINMARFDQLESSLVFWENIAHDVDDTLVQNCANMEFDESTCCDDSPTISSVQLDVEDQSKSSGIDMNSEPAATTAPEPSASQEQPVGNTTVTTGVNDVFWEQFLTENPGSSETQEAQSERKGSDVQMNEGKTTDRGKFWWNMRNVNNLPEQMGHLSQAEKT 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00670 406 SUPERFAMILY "Winged helix" DNA-binding domain 9 103 IPR036390 -
Bva07g00670 406 MobiDBLite consensus disorder prediction 362 376 - -
Bva07g00670 406 MobiDBLite consensus disorder prediction 110 127 - -
Bva07g00670 406 Gene3D - 6 104 IPR036388 -
Bva07g00670 406 MobiDBLite consensus disorder prediction 302 336 - -
Bva07g00670 406 ProSitePatterns HSF-type DNA-binding domain signature. 53 77 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva07g00670 406 SMART hsfneu3 10 103 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva07g00670 406 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-4C 1 387 - -
Bva07g00670 406 MobiDBLite consensus disorder prediction 107 128 - -
Bva07g00670 406 Coils Coil 122 163 - -
Bva07g00670 406 Pfam HSF-type DNA-binding 14 103 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva07g00670 406 PRINTS Heat shock factor (HSF) domain signature 14 37 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva07g00670 406 PRINTS Heat shock factor (HSF) domain signature 52 64 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva07g00670 406 PRINTS Heat shock factor (HSF) domain signature 65 77 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva07g00670 406 MobiDBLite consensus disorder prediction 350 382 - -
Bva07g00670 406 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 1 387 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00670 Bva-Chr7 8576985 8579131 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00670 1 406 HSF AT4G18880 52.871 4.69e-126 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Bva07g00670 HSF_DNA-bind 1.1e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00670 K09419 - gmx:100798004 530.406