Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00665 ATGGCTGACAATTCATCAACTAACGGAACCCACGAGGCTGCCTTGAACATTGACGGCGATCTCAATCACTGTGCcaccaaaaatgaaaactccGGCATCAATGTAACGGTGCCTTTCTTGCAGAAGTTGCTAGCAGAGGTGGTGGGGACGTACTTCTTGATTTTTGCAGGGTGTGCTTCAGTGGTGGTGAATGGAGGATACGATCACGTGGTGACACTTCCAGGGATTTCAATAGTTTGGGGCCTGGCTGTAATGGTGCTTGTTTACTCTGTTGGTCATATCTCTGGTGCCCATTTCAACCCAGCTGTCACCCTAGCTTTTGCTTCCACCGGGAGGTTTCCATTGAAACAGgtaCCAGCTTATATAATAGCTCAGGTTCTGGGATCTACACTTGCAAGTGGGACTCTGAGATTGCTGTTTACCGGTAGCCATGATGTCTTTGCAGGAACTCTCCCATCAGGGACTTATTTGCAATCTTTTGTGATTGAATTCATCATCACTTTCTACCTCATGTTTATAATTTCTGGAGTTGCCACTGATAACAGAgctATCGGTGAGCTAGCTGGGCTTGCAGTTGGGGCTACTGTTCTGTTGAATGTGATGTTTGCAgggCCAATCTCAGGAGCATCAATGAACCCAGCCAGAAGCTTGGGCCCTGCCATCGTATCACATAGATATAGAGGAATATGGATATACATGCTGTCCCCAATTCTAGGAGCCGTCGCCGGCGCGTGGGTTTACAACCTTGTTAGGTACACCGACAAGCCGTTGCGCGAGATCACGAAGAGCGCGTCGTTCATCAAGGCGGCCGGCCGGAGCGCCGGGAAGTG 830 0.4783 MADNSSTNGTHEAALNIDGDLNHCATKNENSGINVTVPFLQKLLAEVVGTYFLIFAGCASVVVNGGYDHVVTLPGISIVWGLAVMVLVYSVGHISGAHFNPAVTLAFASTGRFPLKQVPAYIIAQVLGSTLASGTLRLLFTGSHDVFAGTLPSGTYLQSFVIEFIITFYLMFIISGVATDNRAIGELAGLAVGATVLLNVMFAGPISGASMNPARSLGPAIVSHRYRGIWIYMLSPILGAVAGAWVYNLVRYTDKPLREITKSASFIKAAGRSAGK 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00665 276 ProSitePatterns MIP family signature. 98 106 IPR022357 -
Bva07g00665 276 Gene3D Glycerol uptake facilitator protein. 6 262 IPR023271 -
Bva07g00665 276 CDD MIP 41 250 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva07g00665 276 Pfam Major intrinsic protein 36 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva07g00665 276 PANTHER AQUAPORIN NIP2-1 1 270 IPR034294 -
Bva07g00665 276 SUPERFAMILY Aquaporin-like 36 261 IPR023271 -
Bva07g00665 276 TIGRFAM MIP: MIP family channel proteins 45 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva07g00665 276 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 1 270 - -
Bva07g00665 276 PRINTS Major intrinsic protein family signature 162 180 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva07g00665 276 PRINTS Major intrinsic protein family signature 117 136 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva07g00665 276 PRINTS Major intrinsic protein family signature 41 60 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva07g00665 276 PRINTS Major intrinsic protein family signature 193 215 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva07g00665 276 PRINTS Major intrinsic protein family signature 80 104 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva07g00665 276 PRINTS Major intrinsic protein family signature 230 250 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00665 Bva-Chr7 8543981 8547425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00665 41 273 Major Intrinsic Protein MIP AT5G37810 61.803 1.42e-102 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00665 K09874 - tcc:18596620 407.527