Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00645 ATGCTTGATGCTAAACCGATAACCGAGTCATTGCTCATAAGTGTATTCTGGCTTTCTTTTCAATACTTGGTATTTGGCATGGCTGACATTTTTACCCATGTGGGTCTTCTTGAGTTTTTCTATTCAGAAGCACCAAAAGGGCTTAAATCTACATCGACTTGCTTTCTTTGGATCTCAATGGCTCTTGGTTATTTTCTTAGCAACATAGTGGTGCACACTGTGAATTTTGTCACCAAGGGTATTGCTGGAAATGGAGGCTGACGAGTGTTGCCTATAAACGATATTGCATGGGGAACCAAGGGACAAACAAAGAGCTTGAGAAAAGCTAGAAGTAGAGTGCGACCGGCTGCGGTTtgtgaagaagaaattgaagtgtGCTTCTGCTTAGACCAACTAAGAGCTTGGCCTTGCTTGCCGTCTTCACATTTCACCAGCTTTGCTCTATCAGAATTAGCCTCTCTGAAGGTCTCAGTAGCTGGATGCATgGAAAGTCCAGAGCTTGCTAATGGGAGGACCCAGCGGATGCAAGAGCAGAGAGTTGAGTTTGTGGAAGGAAAAGTGGAttggaaaggaagaaaggcTTCAAAACATGCACATGGAGGAGCAAGAACTTCATTGTTCATTCTAGGaacattttgttttgagaACATGGCAACGTTCTCACTAGCAGTGAACTTGGTGACATACTTCAACGTAATTATGCATTTTCAACTTGCAGATGCTGCCAATCAGTTGACCAATTTCATGGGTGTGAGCTATATACTCTCCATTTTGGTTGCGGTGGTAGCTGACACTTGGATAGGCAGACTCAaagcttctcttttctctataTGCATTGAGTTTCTGGGATTTGTTTTGCTTACAATCCAAGCACACTACAATAGCCTCAAGCCCACCCTTTGCAACGTCTATGACCTAAGTTCTAAGTGTGAAGTAGTTAGTGGAAGCAAAGCAGCCTTTCTCTTCATAGCCCTCTATCTATTGGCCTTTGGAACTGCAGGAGTCAAAGCTACAGTACCATCACACGGTGCAGACCAATTTGATGACAAAGATCCGAAAGAAGCaaaacaaatgtcaagcttctTTAATCTTCTGCTGTTCGCACTTTGCCTAGGTGCTGCGGTTAGCACAACGGCCATTGTGTGGGTTGAAGACAATAAAGGATGGGATCGAGGCTTTGGACTCTCCACCATTGCTATCCTGTTTGGTGTCATAATCTTAGTCTCTGGTTTGACACAATATAGGATTCATGTTGCTCAGGGAACAAGTGCCATCATTGAGATCATACAGGTCTATGTTGCTGCACTACGAAACAGAAATCTTTCTCTTCCTGAGGATCCTGCACTATTATATGAGATAGAGAAAGACAAGGAAGCAGCTATAGAAGTAGAATTTCTTCCTCATAGAAACGTCTACAGATTCTTGGACAAAGCAGCCATCCAAATAACACCTACAATGCATACAGAGACACCAAAGGCTCCAAGCCCATGGAAACTTTGCAGAGTTACGCAAGTGGAAATTGCCAAAATCATTTTAGGCATGGTCCCAATATTTTTATGCACAATAATCATGACCCTTTGCCTAGCTCAGCTCCAAACCTTCTCAATCCAACAAGGGTCAACCATGGACACAAATGTTGccaattcatttaatattcCACCTGCATCAATCCCAATTCTCCCCGTTGCATTCTTGATCATCATCATCCCCGTCTATGACCGAATCATTGTGCCTATTCTACGTAAATGTACTGGTATACCTACCGGCATTACCTACTTGCAGCGAATTGGAGTTGGCCTAGTGCTCTCTATCATATCCATGGCTGTGGCTGCACTCGtagaagtgaaaagaaaaggagtggCTAGAGACAACAACATGCTTGATGCTAGACCTGTACTTCAGCCTTTGCCCATATCAGTATTCTGGCTTTCTTTTCAGTACTTCATATTTGGCATTGCTGACATGTTTACCTATGTGGGTCTTCTTGAGTTTTTCTATTCAGAGGCACCAAAAGAGCTCAAGTCTACATCTACATGCTTCCTTTGGTGCTCTATGGCTCTTGGATACTTTTTGAGTACTATAGTGGTGAAGATTGTGAATGCTGCCTCCAAAAATACTGCAAGTGGAGGCTGatttttcaaagtGAATCCTTATCCAGATGAAAAAGAACTCGATGAATTAGGCAGGCAAGTTGGGCTTGAGCAAAGACAAGTGGTGTTTTGGTTTCAGAATAGAAGATCTCAGAGAAAGGTCAAAATTGAGAAAGCAGATAACAACAGTCTGAGGGCTGAGAATGACAGATTTCGTAGTGAAAATGTTTCTATGAGAGCAGCTCTCCAGAATGCACTGTGCGTTTCTTGTGGGGTTACAGCCCCCACACCAGAAGAAcgtcaaaaaaatattgaaatgcTGCAgcgtgaaaatgaaaatctaaaaGAACAGgctagtaaatatttattaATTGAGAGACTGTCGCTCGTTCTTGCTTCTGGGCACAGCAGACCAAGAGCAGCACCTGGGCCACGATTTTCTAAAGTGGGAACTTCAGCACTGGGTGGATCATCAAGTGATGTTAGTCTAGGTTTTGGTTCTGGCTCTCTGGTTTCAAATAACAATGCATTGCTCGGAAGAGGGATGGCAGAAATGGAGAGGACACTGATGTCTGAGGCAGCTACAAGTGCtttgaaagaatttatttCACTTATAAGCACTGATGAACCCTTATGGATCAAGTCTGCAGCTAACCATAGATCCATTATTAATCGCGAAGCCTACGACGACTTGTTCCCTAGGCCTTATCCTTTCAGAGGTCGAGTAGAATCATCGAGGGAGACACGAAGAGTGTGCATGCCCGCTAGGCAATTGGTTGAAATATTCTTAGATGCAGGCAAATGGGTTGATTTTCTCCCAACCATAGTCTCAAAGTCAAGAACAATCCAAGTACTCAAAACAGGATCAGTAGCAGCCTTGCACCTGATGTATGAACAAATCCACTTCCTTTCTCCATTTATGCCTCCTCAAGAACTCACCTTACTTCGCAAATGTGAGCAAATTGAATGCGGGGTATGGATCATAGTAGACGTCTCATATGATCTCACTAAGGACAACACCTCCGCTCCTCTCATTAGGAAGCGTCCTTCTGGATGCATCATTCGTGATTTGCCTAGAGGGTTCTCTGAGGTTACTTGGATTCAACATATGGAAGTGGGTGACAAAAGACAAACTGATCATTTCCTGCTGCAATGTAATACAGCTCCTCTTTATAGCAGTTTTGCATTGGGAGCAGAACGATGGCTGGTAACACTCGAAATGATGAGCGAGAGATTTGCGTGCTGGTTAGATGAAAGAGCCGCAAATCATGAAGCAGTTGGAGTCATTGATTCAGCTGGTGGAAGGATTGGGATCATGAATCTTGCCCGTAGAATGGTTCAGAACTTCTTTGAAACCCTAAACACGCCAGCTAACCTGGATTTATCTGAACTATCTGATGTGAATAATGGTGAGTTTAAGATCTCGGTTCGCGAGAACAAAGAACCAGGACTGGATAGTAGCTTCAGTATCAGTGGTACTACCTCTCTTTGGCTTCCTCTTCTCCCTCAGACTGTTTTTAACTTCTTCTTggatgagaagaaaagagatcaGTGGGATGCTCTTTGCAATGGAAATCCTGTGCGTAAGATTGGACACATCTCAAATGGAAATCGTCCTGGGAACTGTATATCAATCAATGAGGCTCGCATCCCCGGCGATAACGATGGAGTGATTCTTCAAGAAGCCTGTACAGATCCCGTGGGATGGTTGGTTGTTTATGCTCCATTTGCTACACCAGTCATAGATTTTGCTTTAAAAGGAGAAGACACTTCAATGATCACAGTCCTTCCCTCAGGTTTCGTAATCACCGCGGAGGATCGACCTAACCCTAGTACTGCTGGACCATCTACCAGCAGCAATATTACTGCTGGATCACTGCTGGTTATGGCTTTCCAAATATCAGTTAACCAGGTGAGCTTGGACTCACTGATAGCTCTCAAGACGCTTATTAGCTCCACTGTGGAGGCTATAAGGTTTTCTTTCAGTTGTTA 4082 0.4155 MLDAKPITESLLISVFWLSFQYLVFGMADIFTHVGLLEFFYSEAPKGLKSTSTCFLWISMALGYFLSNIVVHTVNFVTKGIAGNGGRVLPINDIAWGTKGQTKSLRKARSRVRPAAVCEEEIEVCFCLDQLRAWPCLPSSHFTSFALSELASLKVSVAGCMESPELANGRTQRMQEQRVEFVEGKVDWKGRKASKHAHGGARTSLFILGTFCFENMATFSLAVNLVTYFNVIMHFQLADAANQLTNFMGVSYILSILVAVVADTWIGRLKASLFSICIEFLGFVLLTIQAHYNSLKPTLCNVYDLSSKCEVVSGSKAAFLFIALYLLAFGTAGVKATVPSHGADQFDDKDPKEAKQMSSFFNLLLFALCLGAAVSTTAIVWVEDNKGWDRGFGLSTIAILFGVIILVSGLTQYRIHVAQGTSAIIEIIQVYVAALRNRNLSLPEDPALLYEIEKDKEAAIEVEFLPHRNVYRFLDKAAIQITPTMHTETPKAPSPWKLCRVTQVEIAKIILGMVPIFLCTIIMTLCLAQLQTFSIQQGSTMDTNVANSFNIPPASIPILPVAFLIIIIPVYDRIIVPILRKCTGIPTGITYLQRIGVGLVLSIISMAVAALVEVKRKGVARDNNMLDARPVLQPLPISVFWLSFQYFIFGIADMFTYVGLLEFFYSEAPKELKSTSTCFLWCSMALGYFLSTIVVKIVNAASKNTASGGFFKVNPYPDEKELDELGRQVGLEQRQVVFWFQNRRSQRKVKIEKADNNSLRAENDRFRSENVSMRAALQNALCVSCGVTAPTPEERQKNIEMLQRENENLKEQASKYLLIERLSLVLASGHSRPRAAPGPRFSKVGTSALGGSSSDVSLGFGSGSLVSNNNALLGRGMAEMERTLMSEAATSALKEFISLISTDEPLWIKSAANHRSIINREAYDDLFPRPYPFRGRVESSRETRRVCMPARQLVEIFLDAGKWVDFLPTIVSKSRTIQVLKTGSVAALHLMYEQIHFLSPFMPPQELTLLRKCEQIECGVWIIVDVSYDLTKDNTSAPLIRKRPSGCIIRDLPRGFSEVTWIQHMEVGDKRQTDHFLLQCNTAPLYSSFALGAERWLVTLEMMSERFACWLDERAANHEAVGVIDSAGGRIGIMNLARRMVQNFFETLNTPANLDLSELSDVNNGEFKISVRENKEPGLDSSFSISGTTSLWLPLLPQTVFNFFLDEKKRDQWDALCNGNPVRKIGHISNGNRPGNCISINEARIPGDNDGVILQEACTDPVGWLVVYAPFATPVIDFALKGEDTSMITVLPSGFVITAEDRPNPSTAGPSTSSNITAGSLLVMAFQISVNQVSLDSLIALKTLISSTVEAIRFSFSC 1358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00645 1358 CDD homeodomain 710 748 IPR001356 GO:0003677
Bva07g00645 1358 Gene3D MFS general substrate transporter like domains 172 719 IPR036259 -
Bva07g00645 1358 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 182 711 IPR000109 GO:0016020|GO:0022857|GO:0055085
Bva07g00645 1358 Gene3D - 886 1075 IPR023393 -
Bva07g00645 1358 SUPERFAMILY Homeodomain-like 710 757 IPR009057 -
Bva07g00645 1358 Coils Coil 792 819 - -
Bva07g00645 1358 PANTHER PROTEIN NRT1/ PTR FAMILY 4.2 182 711 - -
Bva07g00645 1358 SUPERFAMILY MFS general substrate transporter 205 699 IPR036259 -
Bva07g00645 1358 Pfam START domain 889 1069 IPR002913 GO:0008289
Bva07g00645 1358 SMART START_1 887 1106 IPR002913 GO:0008289
Bva07g00645 1358 SUPERFAMILY Bet v1-like 1130 1327 - -
Bva07g00645 1358 Pfam POT family 275 703 IPR000109 GO:0016020|GO:0022857|GO:0055085
Bva07g00645 1358 Pfam POT family 5 79 IPR000109 GO:0016020|GO:0022857|GO:0055085
Bva07g00645 1358 SUPERFAMILY Bet v1-like 879 1069 - -
Bva07g00645 1358 ProSiteProfiles START domain profile. 878 1109 IPR002913 GO:0008289
Bva07g00645 1358 ProSiteProfiles 'Homeobox' domain profile. 711 750 IPR001356 GO:0003677
Bva07g00645 1358 CDD START_ArGLABRA2_like 884 1105 - -
Bva07g00645 1358 Coils Coil 742 769 - -
Bva07g00645 1358 Gene3D MFS general substrate transporter like domains 3 92 IPR036259 -
Bva07g00645 1358 SMART HOX_1 701 754 IPR001356 GO:0003677
Bva07g00645 1358 PANTHER PROTEIN NRT1/ PTR FAMILY 4.2 7 89 - -
Bva07g00645 1358 Pfam Homeodomain 710 748 IPR001356 GO:0003677
Bva07g00645 1358 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 7 89 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00645 Bva-Chr7 8376047 8394535 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00645 1 84 Organic Solute Cotransporters AT1G69850 45.238 2.72e-16 82.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bva07g00645 PTR2 5.1e-86 CL0015
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00645 - - pavi:110745005 784.252