Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00634 ATGCGCGCAGCGCAAGGAGCAGGGTTTCAATTCCATAATTTCCATCTACTCGGCGCTTGGCTTTGGTATCGCAACACTGTTTCTCCACTCTCGCCAGAGCACCGCAGATTGAATTCTCTTCTTGCATTTCCTTCAGGGATTGCAGGTgaggaaaagaagatgaagcagGTTGTAGGAACAGTGGTTTCAAATAAGATGCAGAAATCAGTGGTGGTGGCAGTGGATAGACTATTCCACCACAAATTATACAACCGATATGTTAAGCGTACCTCTAAATTTATGGCACATGACGAGCAAAACCAGTGTAACATGGGTGACCGAGTTCGACTAGATCCTTCTAGGCCTTTGAGCAAGCGTAAACATTGGATTGTTGCTGAAATTCTCAAGAAAGCACGGATATATGTTCCACCTTCCACTCCAGCAACTAAGAATCCGAGCAGCAGTTCGCAATCACCCGCTTCCTA 464 0.4397 MRAAQGAGFQFHNFHLLGAWLWYRNTVSPLSPEHRRLNSLLAFPSGEEKKMKQVVGTVVSNKMQKSVVVAVDRLFHHKLYNRYVKRTSKFMAHDEQNQCNMGDRVRLDPSRPLSKRKHWIVAEILKKARIYVPPSTPATKNPSSSSQSPAS 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00634 151 Pfam Ribosomal protein S17 56 123 IPR000266 GO:0003735|GO:0005840|GO:0006412
Bva07g00634 151 Hamap 30S ribosomal protein S17 [rpsQ]. 49 126 IPR019984 GO:0003735|GO:0005840|GO:0006412
Bva07g00634 151 TIGRFAM uS17_bact: ribosomal protein uS17 52 121 IPR019984 GO:0003735|GO:0005840|GO:0006412
Bva07g00634 151 PANTHER 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER 51 142 IPR000266 GO:0003735|GO:0005840|GO:0006412
Bva07g00634 151 MobiDBLite consensus disorder prediction 136 151 - -
Bva07g00634 151 MobiDBLite consensus disorder prediction 132 151 - -
Bva07g00634 151 PRINTS Ribosomal protein S17 family signature 112 119 IPR000266 GO:0003735|GO:0005840|GO:0006412
Bva07g00634 151 PRINTS Ribosomal protein S17 family signature 70 93 IPR000266 GO:0003735|GO:0005840|GO:0006412
Bva07g00634 151 PRINTS Ribosomal protein S17 family signature 102 112 IPR000266 GO:0003735|GO:0005840|GO:0006412
Bva07g00634 151 SUPERFAMILY Nucleic acid-binding proteins 51 139 IPR012340 -
Bva07g00634 151 Gene3D - 41 129 IPR012340 -
Bva07g00634 151 PANTHER 37S RIBOSOMAL PROTEIN S17, MITOCHONDRIAL 51 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00634 Bva-Chr7 8203520 8205296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00634 56 125 Cytoplasmic Ribosomal Protein Gene Family AT4G30800 39.437 1.46e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00634 K02961 - zju:107417619 166.392