Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00613 ATGGCTGCTCCTCAGTCCTTGTTTAGCTTTCCTTTCGCTGGCGGCAGCGGTGCTTCCGGTACCATTATCGGTGTTACCATGATCATTATCAGTGGCACAGCTGTAATTTCAGGCACCATATTTGCTCTTTCCTGGCTCATCAAAAAGTGTCAATCTTGCAATGATAATCAACCTGATATGGATGAGAATGAAACTGTGTACCTAATGGTGGACACTATTAGCAGAGATGATGTGCTTGGACAGAAATGTGGAATCTGTTCTCTAGGGTTTTGGGATGCCAACGAAGCAGTTGTTTTGTGGAATTGTCACCATAAATTCCATGTTGCTTGTATCATTGAATGGGACAAAGCAAATACAACCTGTCCGAAGTGTTTCTGTTGCAAAAGCGAGTTCACTTTGGTCTTCTGCATCAAAGATGAACCATATGCTGCTCAAGGAATTGCTAGAAATTA 452 0.4248 MAAPQSLFSFPFAGGSGASGTIIGVTMIIISGTAVISGTIFALSWLIKKCQSCNDNQPDMDENETVYLMVDTISRDDVLGQKCGICSLGFWDANEAVVLWNCHHKFHVACIIEWDKANTTCPKCFCCKSEFTLVFCIKDEPYAAQGIARN 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00613 150 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 79 125 IPR013083 -
Bva07g00613 150 ProSiteProfiles Zinc finger RING-type profile. 83 124 IPR001841 -
Bva07g00613 150 SUPERFAMILY RING/U-box 82 127 - -
Bva07g00613 150 SMART ring_2 83 124 IPR001841 -
Bva07g00613 150 Pfam Ring finger domain 82 124 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00613 Bva-Chr7 7942476 7942928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00613 10 133 C3H Transcription Factor Family AT1G04360 26.752 4.13e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00613 - K19043 ath:AT1G49200 53.1434