Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00610 ATGGTTTTgcctattttctttcatgttgAACCATCTGAAGTTCGACACCAGAAAGGcccttttgcagaagcttttgCTAAACAAAAAGATGCAAAAAGACACAGTGAAGAGAGGATTCAAAGATGGAGAACAGCACTGGAGAAAGCAGCAGATTTGTCTGGATTGCCCTTGGGAGATGGGACGGAAGCAAGTTTGATTGAAAGAATTGTTGGGGAGATCTGGAATATGGGTAGAGAAATTGTGCGCAAAGAATCACCAAATGATCCTGGGCAACGAAGTAGACTTTGGTTCCATGAGGATATTCTTCAAgtactaaaagaaaatacgGGGTCAAACAAAGTGGAGGCTATAAAGCTAACCCTATCTGAACCAGAAGAGGTGCAGTTGACTCTTAAATCCTTCACAAAGATGAAAAGACTTGAACCAGAAGAGGTGCAGTTGACTCCTAAATccttcaaaaaaatgaaaaggctTCGAATACTTATAATACACAATGCACAGTGTTATGGTGATCATCTTGAGTATCTCTCCAATGAACTAAGCTGGCTAAAGCTTTGCCAACCAGTTTCTTCGTTCAAGGATTTCAAAAGGTTGAAACATGTGAATCTCAGAGATTCTAAGTTTATAACTAAAGTACCTGATTTATCGGGCTGTCACAATCTTGAATATCTAGTTCTTCGTGGTTGTTTAAGATTGAAAGAGTTCTCAGAATTTGTTGATAATATGGATTGCTTACGAATAATTCAATTGGACAGAACTGGAATTGAAGCATTGCCTTCATCCATTGAACGTATTACTGGGCTGGAACACTTAAACATGTCTGATTGTCAAAATCTGACAAATATTCCAAGTTGCATTTATAAGTTACAGAAGCTCCAGGAGCTTAGACTTGATAATTGCACCAAACTTGGTAAGTTTCCTGTGTTCAGCAACAAGAGACAAAAATTCACATCATTGAATGAAGGATCAAGCAACATTGAGTCAATATCCAGTTTGAACTTATTTCCCTCGTTATGTCAATTGGACCTGGCAAATTGCAATCTTTCAGAAGTAAATTTTCTTACAGACATTGAGCATTTTCTAGCTCTTGAAACATTAGTCTTGGATGAAAACAACATTACTATGATTCCAGCATGCTTGCACAAATTTGCTAAGTTAAATTACCTCTCTGTGAGTGATTGCAAGCTCTTACAAGAAATTCCACAGCCTCCACCAAATATAGCGGAAATCGATGCCTATGGTTGTGAATCATTGCAAAGATTTTCACAACTGATTAGCACTCATGGAGATCAATTGACAAGTATACGGCGACCAGAGGATTTCAAATGCTTGACACGTATGGAACTCATAGATTGTGAGTCTATAACTGAAGTACCTAATTTATTGAGCTTTCACAATCTtacatatttgaattttgctggttgctcaaaattaaaaaagtttccaaaaattattgataatatgGATTGTTTACAAGAGATTTGTTTAGACAGAACTGGAATTGAAGAATTGCCTTCTTCCATTGAACGTATTACTGGGCTGCAACGCTTATATATGTCTTCTTGTCAAAATCTGACAAATCTTCCAAGTAGCATTTATAAGCTACAGAAACTTGTGGTGCTTCTACTTGATAATTGCAGCAAACTTGGGAAGTTTCCCGTATTCagcaacaagaaacaaaaatttacatcATTGAATGAAGGATCAAGCAACACTGAGTCAATATCAAGTTTGAACTTATTTCTCTCATTAAGGACATTGGACCTGCAAAATTGTAATCTTTCAGAAGTGAACTTTCTTACAGACATTGAGCACTTTCCAGCTCTTTCGAAGTTATACTTGAATGAAAACAACATTACTACAATTCCAGCATGCTTACACAAACTTGCCAAATTAAGTTACCTCAATATGAGTAATTGCAAGCTCCTACAAGAAATTCCAAAGCTTCCGGCAGATATGGGGGAAATTGATGCCTATGGTTGTGAATCATTGCAAATATATTCACAATTTGAAAGCATGCCAAGAGGAGGCACTCATGGAGACCAAGTGATGAGTATGTTGCGTGAGGGGTTTGTCAATATGGTGAAGATGTTGATTCCTGGAAATGAGATTCCAGAATGGTTTAGCCATAAAAGTTCAGAAAGTTCCATATCTTTACGGGTGTCTATAAATACTTCAATAGCCTTAATAGCTTTGGCACTTGGTGCCTTTCTCAGAGCAACTTCATTGGCAGTCACAGTTGTCATCAATGTTGTATACAAACATAGGGTTCATAGAAAAGaactttgttttaaaaaatccatGAAGTCAGGTGATTTGTGGCTATGTTATATTCCTCAaatatttccttcaaatttcAGGGGAGATAACGCTGTTGTCAGAGTTGAGgCATATGATCTAATTCAAGGAGAACTTTATCTTTTATTGGAACTTGATGTCAGTTTGAGGCGAAGTATATGGTGCAAATA 2468 0.3456 MVLPIFFHVEPSEVRHQKGPFAEAFAKQKDAKRHSEERIQRWRTALEKAADLSGLPLGDGTEASLIERIVGEIWNMGREIVRKESPNDPGQRSRLWFHEDILQVLKENTGSNKVEAIKLTLSEPEEVQLTLKSFTKMKRLEPEEVQLTPKSFKKMKRLRILIIHNAQCYGDHLEYLSNELSWLKLCQPVSSFKDFKRLKHVNLRDSKFITKVPDLSGCHNLEYLVLRGCLRLKEFSEFVDNMDCLRIIQLDRTGIEALPSSIERITGLEHLNMSDCQNLTNIPSCIYKLQKLQELRLDNCTKLGKFPVFSNKRQKFTSLNEGSSNIESISSLNLFPSLCQLDLANCNLSEVNFLTDIEHFLALETLVLDENNITMIPACLHKFAKLNYLSVSDCKLLQEIPQPPPNIAEIDAYGCESLQRFSQLISTHGDQLTSIRRPEDFKCLTRMELIDCESITEVPNLLSFHNLTYLNFAGCSKLKKFPKIIDNMDCLQEICLDRTGIEELPSSIERITGLQRLYMSSCQNLTNLPSSIYKLQKLVVLLLDNCSKLGKFPVFSNKKQKFTSLNEGSSNTESISSLNLFLSLRTLDLQNCNLSEVNFLTDIEHFPALSKLYLNENNITTIPACLHKLAKLSYLNMSNCKLLQEIPKLPADMGEIDAYGCESLQIYSQFESMPRGGTHGDQVMSMLREAYDLIQGELGFSGKPKLEILIPGSEIPGWFSHQRLESFISF 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00610 730 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 75 140 - -
Bva07g00610 730 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 578 725 - -
Bva07g00610 730 Gene3D Ribonuclease Inhibitor 312 480 IPR032675 -
Bva07g00610 730 Pfam Leucine rich repeat 583 642 IPR001611 GO:0005515
Bva07g00610 730 Gene3D Ribonuclease Inhibitor 127 311 IPR032675 -
Bva07g00610 730 Gene3D Ribonuclease Inhibitor 481 679 IPR032675 -
Bva07g00610 730 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 204 429 IPR044974 GO:0006952
Bva07g00610 730 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 142 185 IPR044974 GO:0006952
Bva07g00610 730 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 75 140 IPR044974 GO:0006952
Bva07g00610 730 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 54 IPR035897 -
Bva07g00610 730 Gene3D - 1 81 IPR035897 -
Bva07g00610 730 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 578 725 IPR044974 GO:0006952
Bva07g00610 730 ProSiteProfiles TIR domain profile. 1 77 IPR000157 GO:0007165
Bva07g00610 730 Pfam TIR domain 2 76 IPR000157 GO:0007165
Bva07g00610 730 SUPERFAMILY RNI-like 196 645 - -
Bva07g00610 730 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 204 429 - -
Bva07g00610 730 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 142 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00610 Bva-Chr7 7898852 7909999 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00610 442 558 WRKY Transcription Factor Family AT4G12020 37.607 2.09e-15 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00610 - - rcn:112198604 279.256