Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00596 ATGAGTCATAGCTCAACCGAGAACGAAGCCAGCTCGAGTGAGAAGAAGTACAACGGAGTTCGTCGCCGGAAGTGGGGCAAGTGGGTATCGGAGATTCGTGTTCCGGGCACTCAAGAACGTCTCTGGTTGGGCACCTATGCGACAGCGGAAGCCGCAGCCGTGGCCCACGACGTAGCATTCTTTTGTCTGAGGAGACCGGAAAAAGTGGACAAGCTCAATTTTCCGGACATGTTGTCGTCTTATGTTGCTCAGAGAGCTGTGTCGCCAAGGTCGGTGCAGCAGGCGGCGTCTGATGCCGGCATGGCGGTTGATGCTAACTACGCCCAGAGAATCACTGAGAATACAGAAACTCATGTTGAGAATATGAAGCAGGAAACTGATGAACCCAGAGGAGAATACAATCATGGGCAAGCTCAAAACGACGGAATTTGGTGGGAAAATGTGGGAGAAGATAACTGGAGGACATGGGAAGCTGGCAAACAAGATGAACATAGAGATCATGAGGAAGATTTGGGCATTTCCATTGAAGATTATCTTTA 539 0.5009 MSHSSTENEASSSEKKYNGVRRRKWGKWVSEIRVPGTQERLWLGTYATAEAAAVAHDVAFFCLRRPEKVDKLNFPDMLSSYVAQRAVSPRSVQQAASDAGMAVDANYAQRITENTETHVENMKQETDEPRGEYNHGQAQNDGIWWENVGEDNWRTWEAGKQDEHRDHEEDLGISIEDYL 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00596 179 MobiDBLite consensus disorder prediction 159 179 - -
Bva07g00596 179 Gene3D AP2/ERF domain 15 76 IPR036955 GO:0003700|GO:0006355
Bva07g00596 179 Pfam AP2 domain 16 65 IPR001471 GO:0003700|GO:0006355
Bva07g00596 179 MobiDBLite consensus disorder prediction 1 20 - -
Bva07g00596 179 ProSiteProfiles AP2/ERF domain profile. 16 75 IPR001471 GO:0003700|GO:0006355
Bva07g00596 179 SMART rav1_2 16 81 IPR001471 GO:0003700|GO:0006355
Bva07g00596 179 PRINTS Ethylene responsive element binding protein signature 39 55 IPR001471 GO:0003700|GO:0006355
Bva07g00596 179 PRINTS Ethylene responsive element binding protein signature 17 28 IPR001471 GO:0003700|GO:0006355
Bva07g00596 179 SUPERFAMILY DNA-binding domain 16 76 IPR016177 GO:0003677
Bva07g00596 179 CDD AP2 15 76 IPR001471 GO:0003700|GO:0006355
Bva07g00596 179 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF020 5 128 - -
Bva07g00596 179 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 5 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00596 Bva-Chr7 7763001 7763977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00596 13 121 AP2-EREBP Transcription Factor Family AT1G22810 59.649 3.39e-46 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Bva07g00596 AP2 1.8e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00596 - - qsu:112006584 167.548