Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00565 ATGTCTTCGGATCTCTATGTTCTCGATGCTTCATTCCATCGACATTCAAGTTCAGACATGGCCTCCCCTAATGGAGGAGGAGACCTTGTGTTTTTTTCTGACTCTTATCCTTTCCCCTTCTGCACTGCCTCTCCCATTATTGATATCGCTCAAGAGAATTCCAACAGCCAAACACAAGAAATCCCACTGGATGAAATTCCCTCTCTTGACCCCTTAGGCTCAtccccttctttcttttctttttctcctccgAGTAGCCACTTAGAAAGTTGGAGCCTTTATGAGGCTAACCCAGTGCAGCCTTTGTCTACCATCCAAAATTTAGATAGCGAGTTTGGCAAATTCTCTGTTTTGGATGGGCTGGAGGCGAAAAGTGAAGAATTCCAAATGGGTGTGGATTATAACTACAATCACCAATTTGCTACTCATAGTTACGGTGATGCTGAAAATGCATCAAAATTCATGCAGAGGAGCTTCAGCAGCAAATCCTTTGATGCGAAGCCTGGTTTTCTTTGTCAACCTCAACATGAAACTGTCATGGACTCCCCAAATTTTCAAAGCCAGGCCTTAAGCTCTCCTGAAAACAGTTTCTCCAATGGCCAGATGAGGAGGGTGTGTAGCACTGGAGATTTGCAGAATATTAAAAAGTCAAACGCGGAAGTGTCTTTCCTGGAGGAAGCAAACTTTAAAGTAGGACGTTACAGTgcggaagaaagaaaagagagaatctCGAAATACAGGGCCAAGAGAAGTCAGAGAAACTTCAACAAGACTATCAAGTATGCATGCCGAAAGACACTAGCCGACAATCGACCCCGCATACGTGGCAGATTCGCGCGCAACGACGAGACCAACGATATTCCCAAGGCTCCTTGCTCCAACAGAGATGAAGACGAAGACTACTCCTGGATTGAAGGGCTGTTGTTGAATGACGAACAAGATCAGGATGTAACTATTAGAGCACAAGAGTATGCAAACAGTTGTGGAGGTCCTCAGTTTCAGTACGATGGCTTTTG 1016 0.4242 MSSDLYVLDASFHRHSSSDMASPNGGGDLVFFSDSYPFPFCTASPIIDIAQENSNSQTQEIPLDEIPSLDPLGSSPSFFSFSPPSSHLESWSLYEANPVQPLSTIQNLDSEFGKFSVLDGLEAKSEEFQMGVDYNYNHQFATHSYGDAENASKFMQRSFSSKSFDAKPGFLCQPQHETVMDSPNFQSQALSSPENSFSNGQMRRVCSTGDLQNIKKSNAEVSFLEEANFKVGRYSAEERKERISKYRAKRSQRNFNKTIKYACRKTLADNRPRIRGRFARNDETNDIPKAPCSNRDEDEDYSWIEGLLLNDEQDQDVTIRAQEYANSCGGPQFQYDGF 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00565 338 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 26 335 IPR045281 GO:0009909
Bva07g00565 338 PANTHER CCT MOTIF FAMILY PROTEIN 26 335 - -
Bva07g00565 338 Pfam CCT motif 239 281 IPR010402 GO:0005515
Bva07g00565 338 ProSiteProfiles CCT domain profile. 239 281 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00565 Bva-Chr7 7416084 7417426 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00565 235 286 C2C2-CO-like Transcription Factor Family AT5G24930 51.923 1.14e-11 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bva07g00565 CCT 8.9e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00565 - - pop:7458191 356.681