Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00553 ATGGGACGTTCCCCTTGTTGTGAGAAAGCTCACACCAACAAAGGTGCTTGGACCAGAGAAGAAGACCAACGCCTTATTGATTACATACGCGTCCATGGCGAAGGTTGCTGGCGTTCTCTCCCCAAAGCTGCAGGATTGCTTAGATGCGGTAAGAGTTGCCGATTGAGATGGATAAACTACCTTCGTCCTGACCTCAAACGTGGGAATTTCACTGAAGAGGAAGATGATTTAATCATCAAACTCCATAGTTTACTTGGAAATAAATGGTCTCTGATTGCGGCTCGATTACCTGGTAGAACCGATAACGAGATCAAGAACTACTGGAATACTCACATCAAGCGCAAGCTCATAAGCCGTGGAATTGACCCACAAACTCACCGTCCTCTCAATGAAACCGCCGCAGCCACTACCGCCGCCGTTGCAGCCGCCGCCACAGCCACTCAATTGGATTTCAAAAAATCTTCTTTTCCAGTTGCGGAAATCAATCTCGTAAAACAGAGCCAAGATAATTTCAATTGCATCAATTTTGGCACTGGATTGAAGAAACCCAAGAAAGAGACAATTGAAGATTTGAACTACGCCAGCAGTGATACAACCACCGAGGAAGGGTCGCCATTGCAGCGAGATTCGTACGGTGGCGAGCTCAACCTTGAGCTCTCAATCGGCCTGGTCCCTTATCACTCTAAGTCAACTCGTGGGAACTCGGCCGAGTCGAAACTTGAGTTAGTTCCGCTCCAGCTCGTCGGCGCAGTGCAGCCTGCTATGGCCGCTCAGGCGGCGGCGGTGTGTTTGTGTTGCCAGTTGGGTTATCAGAACGGCGAACTATGCAGTCAGTGCCAGTTCAAGAGATATTgttcaaatttgaattctta 872 0.4805 MGRSPCCEKAHTNKGAWTREEDQRLIDYIRVHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDDLIIKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLISRGIDPQTHRPLNETAAATTAAVAAAATATQLDFKKSSFPVAEINLVKQSQDNFNCINFGTGLKKPKKETIEDLNYASSDTTTEEGSPLQRDSYGGELNLELSIGLVPYHSKSTRGNSAESKLELVPLQLVGAVQPAMAAQAAAVCLCCQLGYQNGELCSQCQFKRYCSNLNS 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00553 290 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bva07g00553 290 CDD SANT 69 112 IPR001005 -
Bva07g00553 290 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Bva07g00553 290 CDD SANT 16 61 IPR001005 -
Bva07g00553 290 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bva07g00553 290 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bva07g00553 290 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Bva07g00553 290 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bva07g00553 290 SMART sant 66 114 IPR001005 -
Bva07g00553 290 SMART sant 13 63 IPR001005 -
Bva07g00553 290 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 257 - -
Bva07g00553 290 Gene3D - 68 138 - -
Bva07g00553 290 Gene3D - 14 66 - -
Bva07g00553 290 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bva07g00553 290 PANTHER MYB-RELATED PROTEIN 1 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00553 Bva-Chr7 7321449 7322872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00553 1 239 MYB Transcription Factor Family AT4G09460 59.350 1.32e-94 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva07g00553 Myb_DNA-binding 6.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00553 K09422 - jre:109006329 399.823