Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00548 ATGCCACTCCCCACGTCATCACCTCTCCGGGTCCCACACCAACGCAGCGCCGCTGTTCTGCGGGATCGCCGAAATATAGCCGCGAACCAGAGGCTCTTCATCTGGGTTTCCATTCACAGAGACACCTGTCTAGGGTTCCGTTATCAAGCGGCGTCTCTGTTTCGAGCTGTTGCTAATTCTCTATTTTGCAAAAGCATGGCCTTTTGGGGATTGGAAGTAAAATCGGGGAAACCtatttctcataaatttgATGACTTGAAAGGACGACTCCATATTTCAATGgCAACCTTGGGGTCTGGTTCTGCATCCTCCAAAAGTATACTTCAGTGTAATGTGGGAAACAGAAGCCCTGTTTATCTATGCTCTTTGTATCCCGGAAGCAGCGAATCATTGCaattaaatttggaatttGAGGAGGTTGATGAAGTCATCTTCTCAGTAATTGGTCCTCGGAGCATTCACTTGTGTGGTTATTATCTGGGTTGTGGTCGAAATACCAATCTCAATGAGGAGTCAGAATCATATGGGGAAGATATCAGGGACACAGAGACAGAGAGATCTGGCGACGATGAAGATGATTATGAGGATAGTTTTATCGATGACAGTGACCCAGAGGTTCTCCCACCCTCTCCCATTTCTACTGAAGAGAAAGACTCGCATCATAAGAGGACAAAAGATAGGGAAGGCAGCTGTCGACGACTGAGGAGAAAGTACCAATTAGTTGAATCAGATGATGAGGGGTatcttgaagaaaaaataattgccAATAACAATATACATGACCAAActaaagaaaatcataatgaAGACAGTCTACCAATTTCATCTCTTTACAAGAGTAAAACTGCTGGAAGGGTCTTGGACCAGGAAATGGATGAGGGTGATGACAGGGGAGTGGATAATGACAGCAACAAGAATGGTGAAGATGGTGACAATGAGCTTGCACATCATcagacacatagTAGAGGAGGTGAACAATTGGAGAACTTGCCAGAGCCTTGCACTGTCCAAGGTGTTGACAATGttcagaaattgaaaaagaaaaaaaaggaaaagagaaaggaggttaaaaattttgaagctgAGGGTGCATGTAATGGCCAATCTATCAAACTGGATAATGGCATGCAAGATGAGCCAACAATGGACGAGATAGTCCAGGATCTTCCAATAATAAATGGACAGAGTCAGGAGCAAGTCAATGTTAGGAAAACTCAAACTATGGATAAATTAGACCCTTCCTCTGAGATTGGTCATGAACAAGGTGAAAagcctaaaaagaaaaggaaagaacgGCCAAAGGAGGTGATAACTTTGGTCGCTAGTGGTGTTGATGATATCAATCACGTTGAGAAGGATAAAGCCCaacaagatgaaataaaagcTGAACAAAGTCAAGAACACATTATTGAGAGTCAGGAAAAgactggaaaaagaaagaggaagaagaaacaacaGATGGATGAAGGTTCACATTGTGAAGTTGACAATGCTGGTGGCGAAGTTGTCATCAAAGAATCTAAAGTGCAAAGAGATGAGACAGAGTCTGATAATGTGATCCATGGGTTTCCTGAAGGGAAAGAGCAAGGCCAGAAGCTGAACAATGAAGAGGGAGTTTACCATGGAGCTCAAGACTTTCCTGATGAAAATCAATCTGAGTATATCAAAgttaagaaaaggaagaaaaagagtaaaagtCAGGGGGATGTAAAAGTTGTGACGTCTGATTCGGCTCAATTACCTGTTGATCGAAATAGTGGTCCCTTGGAAGAGGATGGGAACAAGATGGCTGATAAGTCATCTCAAGTTAGAACATTGTCCAATGGACTAGTTATTACAGAACTGGAAAGGGGGACAGAAGATGGTAAAATTGCCACATTGGGAAGAAAGATCAGTGTTCATTACATTGGCAAATTGAAGGAGAATGGAGAAGTATTTGAGTCAAATGTTGACCACGCACCTTTCAAGTTTCGCCTTGGTAAGGGAGAAGTCATGAAGGGCTGGGATCTTGGCCTTGAAGGTATGCAGGttggagaaaagagaagactGATAATCCCACCATCACTGGGGTTTGGGAATGATGGATATGGTGAAAATATACCACCAAACTCATGGTTGGTTTATGACCTAAAGCTGGTTAAAGTCCATTG 2150 0.3865 MPLPTSSPLRVPHQRSAAVLRDRRNIAANQRLFIWVSIHRDTCLGFRYQAASLFRAVANSLFCKSMAFWGLEVKSGKPISHKFDDLKGRLHISMATLGSGSASSKSILQCNVGNRSPVYLCSLYPGSSESLQLNLEFEEVDEVIFSVIGPRSIHLCGYYLGCGRNTNLNEESESYGEDIRDTETERSGDDEDDYEDSFIDDSDPEVLPPSPISTEEKDSHHKRTKDREGSCRRLRRKYQLVESDDEGYLEEKIIANNNIHDQTKENHNEDSLPISSLYKSKTAGRVLDQEMDEGDDRGVDNDSNKNGEDGDNELAHHQTHRGGEQLENLPEPCTVQGVDNVQKLKKKKKEKRKEVKNFEAEGACNGQSIKLDNGMQDEPTMDEIVQDLPIINGQSQEQVNVRKTQTMDKLDPSSEIGHEQGEKPKKKRKERPKEVITLVASGVDDINHVEKDKAQQDEIKAEQSQEHIIESQEKTGKRKRKKKQQMDEGSHCEVDNAGGEVVIKESKVQRDETESDNVIHGFPEGKEQGQKLNNEEGVYHGAQDFPDENQSEYIKVKKRKKKSKSQGDVKVVTSDSAQLPVDRNSGPLEEDGNKMADKSSQVRTLSNGLVITELERGTEDGKIATLGRKISVHYIGKLKENGEVFESNVDHAPFKFRLGKGEVMKGWDLGLEGMQVGEKRRLIIPPSLGFGNDGYGENIPPNSWLVYDLKLVKVH 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00548 715 MobiDBLite consensus disorder prediction 389 407 - -
Bva07g00548 715 MobiDBLite consensus disorder prediction 184 202 - -
Bva07g00548 715 MobiDBLite consensus disorder prediction 259 434 - -
Bva07g00548 715 MobiDBLite consensus disorder prediction 214 230 - -
Bva07g00548 715 Gene3D - 584 715 IPR046357 GO:0003755
Bva07g00548 715 MobiDBLite consensus disorder prediction 482 521 - -
Bva07g00548 715 PANTHER PEPTIDYLPROLYL ISOMERASE 66 322 - -
Bva07g00548 715 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 456 715 - -
Bva07g00548 715 MobiDBLite consensus disorder prediction 408 434 - -
Bva07g00548 715 MobiDBLite consensus disorder prediction 170 230 - -
Bva07g00548 715 Gene3D Nucleoplasmin core domain 62 162 - -
Bva07g00548 715 PANTHER PEPTIDYLPROLYL ISOMERASE 456 715 - -
Bva07g00548 715 Coils Coil 341 361 - -
Bva07g00548 715 MobiDBLite consensus disorder prediction 447 600 - -
Bva07g00548 715 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 627 715 IPR001179 GO:0003755
Bva07g00548 715 Coils Coil 165 185 - -
Bva07g00548 715 MobiDBLite consensus disorder prediction 285 324 - -
Bva07g00548 715 MobiDBLite consensus disorder prediction 447 475 - -
Bva07g00548 715 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 623 712 IPR001179 GO:0003755
Bva07g00548 715 Pfam Nucleoplasmin-like domain 68 160 IPR041232 -
Bva07g00548 715 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 66 322 - -
Bva07g00548 715 SUPERFAMILY FKBP-like 597 714 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00548 Bva-Chr7 7264972 7275251 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00548 627 712 Calmodulin-binding Proteins AT5G48570 45.977 3.82e-17 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00548 K14826 - gmx:100798135 570.852