Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00340 ATGGCGTCTTCCCAGGTTGAAATCGCTTCCTCTCCGAGGTTTGGTTGTGTTCTCAGAGACCGTAACCGTCGTGATGGTTGCAGAGACAGCAATGCCCGTTTCCAGAAAAACCTCAAGAATTTCGTCAGGGATCATGTAAACAACTGCATTTCCATCTCGTCTGATTCTTCCTCAGACGAGAACCGGCGTAATCAAATCAACAACGTTGATTCCTTGGCCGCAAAAAACAATCTTGCGAATCTGAGATTCACCAGCAACAACAGAGAAAAGGGGGATGAATCTTCTTTTGGGAGCAGGAAGcattcaaaatcttttgatCGATGGGCAGCAAGGCAAGCTAGAGAAATGGTGTCAACAACTGAGACTGAAGCCAAGCTCTTGGCATTGCCCAATTCCGAGCCTTGTAAGAGCGAAGAATCCCcgtctccttcttcttctcgtCATACTCGTACCCCATCTGGAATCCCAAATCTCGCtgcttcttctcttgttcaaATTTGGGAAAAGAGGCTTAACCAATCCAACAGCACCAAATCCAATGCATCACCCAACAATGGGAGGTCTAGCCCCAATGGGAAGTCTGCTGATCATCCATTTTCTGTGGAAGAACAATGCATTGAGGCTACTGCTTCAGGGGAACCTGCTATTGTTAGTGAAGAATCATTTCCAGATTATGAATCCGATAAAACTTGTTCGCTACAAAGACAGGATTCAGATGATTCTGCAGAGAGTGACAGGGTTAGAGTTGCAGACATTATCAAGAGATTAACTGCTAGTGATGACAGTAATGATCACGAGCAGTCTAGTAACATTATGGGCTCTCCATCTAGAGAGCGTGAACGTACTCCTACACCAGAGGTAGCAGATTACAGAGTTTTCCCTCAGGTTACAACTCCTCGGTTAAGAGGGCGGCTAGCTTTCCACGATTTGCTTATGCAGATACACCGTGATCGCCACAGGGAGCTTGATAATCTAGTAGAGAGAGCATCGGTGTCAAAGTTTACACAAAGAGGCAGAATTCAGTCATTGCTTAAGCTAAAATTATTACAACGAGGCGTTGCAGTAGCTCATGGTCAATCCCGCCAACGATCAACACTGTCTCCGGTGAGCAGGCACTCGCAAGGATCTTCGATTATGCAACTAAGGGAAAGATTTATCATGAGTGTTGAACATGGAAGTACTTCCCAGGCAGAAGTATCTGAACAAAGAATTCCTCGTTCGGAGATAGCAAACAACATCACACAATTGGATAATTCTAAAAAGTATAATCAGCTCAAAAAAGATACTCCCCTTCAGATAGTTCCCAGCACTGATAATCAAAGCACAGCGCCTACACAGAATTCGGTGACTCGGACTAGAGCTGATGACAATAAAGACGAAGCTCGTCCAAGTTCAGATGTCACATCCCAAGTAACATGCTCCAAGGCCAAAACCATTGACTCCCCGAAAACTGCTGAGACAACCCCAGCAAAAGAGATTGCAGATGCAGGTAAAGAGCAGAATGCTACTGCTGAAACCAGCTCTGATGATACTTTAGAAGACTCTAGTTATCAGCAGAATGCTACTGCTGAACCTAGCTATGATGATACAATACAAGAGTCAAATTATCAGCAGAATGCCACTGCTGAAAACAGCTATGATGATATAACAGAAGATGAAGAGGCAAGTTATCAGCAGTATGCTGAAAGCGGTTATGATGACGAGGTAGATGCCAGTGAGCATAATTATGATGAAACTAGTTATGACTGGATGAGTCAGATTTCTCGCCCTAGGAGCTATTGGGAAGACCAAAGGAAAGCATGGTATAGGGAGGTGCTTGATGCTGGTTCACACAATGAGGAGATACGTCAACTTCTTGAAAGAAGAACTGTGTCAACTTACCTCGCCAGTGACTTCCGGGGTAGAATGGATAGGCTGATGGTGTCTCACATTGATACACAAACACACCTAGCCTGTAGTAGTCAAGATGATGACGAGGACAGACGAGGGAGAATGGTCCAGTTGATAGCTTTTCTACAAGAACATTTGCATCCTGCTCACAATCACgaagaagatggagaagaGAGAGGAGTGGAGAAGGCAGAAGAGGTGCAAGAACAAcaggaggaagaagaggagagCTCTCAATACACTAATCATGATGTCAATGATTATTATAATCAATCCTCATCAccttcctcttctcttttgaGAACATGGAGTTACAGAGACAATGAAACTGGTGATGAATCTGATAGAGTTGCTTCTCCATCTTCACCGCAACCATCTCAATCTCATTCTTCTCCGTCTCAGTCTTCATATCAGGATAATCGGCAATACTCTTCATCTGCCAATCACCATTCAATTGAAATGGAACTGATATGTGATTTAAGAAGCCAAATGGATCAACTTCATCAAGAGATGTCTGAGCTGAGGAAATCAATAAAGAGCTGCATCGACATGCAAATGATGCTACAAAAATCGATGATGAATCGAGAGGCCTACACAGttaaaaatgaagaaaaagagtcCCATGACAGGAAACGTAAGAAAGGCAACTGTTGTATTTGCTATGAGAAGAAAGTTGACTCACTTTTATACAGGTGTGGGCACATGTGTGCATGCATAAAGTGTGCCAATGAGTTGCAATGGAACGGTGGCAAGTGTCCAATATGCCGTGCGCCAATATTAGATGTTGTGCGAGTGTACGTGGATTCATA 2699 0.4179 MASSQVEIASSPRFGCVLRDRNRRDGCRDSNARFQKNLKNFVRDHVNNCISISSDSSSDENRRNQINNVDSLAAKNNLANLRFTSNNREKGDESSFGSRKHSKSFDRWAARQAREMVSTTETEAKLLALPNSEPCKSEESPSPSSSRHTRTPSGIPNLAASSLVQIWEKRLNQSNSTKSNASPNNGRSSPNGKSADHPFSVEEQCIEATASGEPAIVSEESFPDYESDKTCSLQRQDSDDSAESDRVRVADIIKRLTASDDSNDHEQSSNIMGSPSRERERTPTPEVADYRVFPQVTTPRLRGRLAFHDLLMQIHRDRHRELDNLVERASVSKFTQRGRIQSLLKLKLLQRGVAVAHGQSRQRSTLSPVSRHSQGSSIMQLRERFIMSVEHGSTSQAEVSEQRIPRSEIANNITQLDNSKKYNQLKKDTPLQIVPSTDNQSTAPTQNSVTRTRADDNKDEARPSSDVTSQVTCSKAKTIDSPKTAETTPAKEIADAGKEQNATAETSSDDTLEDSSYQQNATAEPSYDDTIQESNYQQNATAENSYDDITEDEEASYQQYAESGYDDEVDASEHNYDETSYDWMSQISRPRSYWEDQRKAWYREVLDAGSHNEEIRQLLERRTVSTYLASDFRGRMDRLMVSHIDTQTHLACSSQDDDEDRRGRMVQLIAFLQEHLHPAHNHEEDGEERGVEKAEEVQEQQEEEEESSQYTNHDVNDYYNQSSSPSSSLLRTWSYRDNETGDESDRVASPSSPQPSQSHSSPSQSSYQDNRQYSSSANHHSIEMELICDLRSQMDQLHQEMSELRKSIKSCIDMQMMLQKSMMNREAYTVKNEEKESHDRKRKKGNCCICYEKKVDSLLYRCGHMCACIKCANELQWNGGKCPICRAPILDVVRVYVDS 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00340 899 MobiDBLite consensus disorder prediction 430 451 - -
Bva07g00340 899 PANTHER BNAC05G24000D PROTEIN 1 899 - -
Bva07g00340 899 PANTHER BNAC05G24000D PROTEIN 1 899 - -
Bva07g00340 899 Pfam Zinc finger, C3HC4 type (RING finger) 844 891 - -
Bva07g00340 899 MobiDBLite consensus disorder prediction 135 156 - -
Bva07g00340 899 MobiDBLite consensus disorder prediction 263 277 - -
Bva07g00340 899 CDD mRING-HC-C3HC5_NEU1 846 886 - -
Bva07g00340 899 MobiDBLite consensus disorder prediction 86 107 - -
Bva07g00340 899 MobiDBLite consensus disorder prediction 174 195 - -
Bva07g00340 899 MobiDBLite consensus disorder prediction 358 377 - -
Bva07g00340 899 MobiDBLite consensus disorder prediction 222 285 - -
Bva07g00340 899 MobiDBLite consensus disorder prediction 676 696 - -
Bva07g00340 899 MobiDBLite consensus disorder prediction 222 262 - -
Bva07g00340 899 MobiDBLite consensus disorder prediction 464 485 - -
Bva07g00340 899 MobiDBLite consensus disorder prediction 712 735 - -
Bva07g00340 899 MobiDBLite consensus disorder prediction 675 776 - -
Bva07g00340 899 ProSiteProfiles Zinc finger RING-type profile. 847 886 IPR001841 -
Bva07g00340 899 MobiDBLite consensus disorder prediction 745 776 - -
Bva07g00340 899 MobiDBLite consensus disorder prediction 84 107 - -
Bva07g00340 899 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 822 898 IPR013083 -
Bva07g00340 899 MobiDBLite consensus disorder prediction 174 198 - -
Bva07g00340 899 MobiDBLite consensus disorder prediction 125 156 - -
Bva07g00340 899 MobiDBLite consensus disorder prediction 430 529 - -
Bva07g00340 899 SUPERFAMILY RING/U-box 846 892 - -
Bva07g00340 899 MobiDBLite consensus disorder prediction 500 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00340 Bva-Chr7 4435727 4439618 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00340 847 899 C3H Transcription Factor Family AT3G06140 39.623 1.91e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00340 - - ccaj:109812885 706.057