Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00327 atgAAGCCAAAAATGTATGAACAAAGTGGTTGCTTTGATCCCAACACAATAGCACAAACAGTTGCAGATTCAACTCTTCCACCACTCTTGGTTGCACCCAACAACACAAACAGCTTTGAAGATAATCTCTTCTATCACCCCCACAACCCGCCATGCCCGGAGGATGTCTCCGCCTTGACAACCATGGAGATCACACACCAGAACCATCTGGGTTTGAACATGGGGAATCAGAATTCAATCAACAACTTTCTTGATGATAATGTGGATacccatttggtccaagaggTCATTGATGTTGTTCCCTATGACCATGATCAATCTACTTGGGGTGTTGAGGAATTGCAAGAAATGGGTTATGGTATTATTCACCAACAAGATGATCAGCATCCAAATGATCAGCAATTTCAACAAATTGAGGCACAAAATTGCAGCCAAAGCTACAATTCCAACAATTCATCTACCATATTGGACCATTCTTACCCTTCACCAGATCTCTTAAACCTCCTCCATTTACCCAGATGCTCAAATTTTCAGAATTCCATGGGATTTTTCGGAGATTTCCAAATAGGAACAGAGACAACAACAGCTTCCTCAGTTTTATATGACCCTCTCCTTCATTTGAATCTGCCACCACAGCCTCCAGCACTCAGAGAGTTGTTTCAGTCTCTTCCCCGCGGTTACAGCTTGCCAACCTCCAGAAATGGTTCCTCCCTCTTTGGTGGAGGAGATGATATTGATGCCAATGGAGTTGTGTATCAAGATGGAGATAATGAAATGCTTGAATTCAACAGAGAAATTGGCTGTGTTGGTAAAGGAAGAGCAGCAAAAGGCTCCAAACATTTTGCAACtgagaaacaaagaagagagcAATTGAATGGCAAATACAAAATTCTAAGGAGCCTCATTCCAAAACCCACCAAGattgatAGAGCATCTGTGGTGGGAGATGCCATTGATTATATCAGAGAGCTTCTTAGAACAGTGAGTGAGCTGAAATTGTTAGTGGAGAAGAAGAGATATGGCAAAGAGATGAGCAAGCGGCGCAAAACAGAAGATGATGCTGCAGAGAGCTGTAACATGAAGCCCTTTGGAGACCTTGATGGTTGTATAAGGACATCATGGCTTCAGAGAAAATCCAAAGACACCGAGGTTGATGTTCGGATAATTGATGATGAAGTCACAATCAAACTGGTTCACAGGAAGAACATCAATTCTCTGCTGTCTGTCTCGAAGGTTCTTGAAGAACTTCAGTTAGATCTTCATCATGTTGCAGGTGGCCATGTTGGTGAATATGGCAGTTTCTTGTTCAATAGCAAGATATATGAAGGTTCTTCACTGTATGCAAGTGCCATAGCCAACAAGGTGATTGAGGTTATGGACAGGCAATATGCAGCAGCTGTTCCCACAACTAGCAGCTATTA 1421 0.4103 MKPKMYEQSGCFDPNTIAQTVADSTLPPLLVAPNNTNSFEDNLFYHPHNPPCPEDVSALTTMEITHQNHLGLNMGNQNSINNFLDDNVDTHLVQEVIDVVPYDHDQSTWGVEELQEMGYGIIHQQDDQHPNDQQFQQIEAQNCSQSYNSNNSSTILDHSYPSPDLLNLLHLPRCSNFQNSMGFFGDFQIGTETTTASSVLYDPLLHLNLPPQPPALRELFQSLPRGYSLPTSRNGSSLFGGGDDIDANGVVYQDGDNEMLEFNREIGCVGKGRAAKGSKHFATEKQRREQLNGKYKILRSLIPKPTKIDRASVVGDAIDYIRELLRTVSELKLLVEKKRYGKEMSKRRKTEDDAAESCNMKPFGDLDGCIRTSWLQRKSKDTEVDVRIIDDEVTIKLVHRKNINSLLSVSKVLEELQLDLHHVAGGHVGEYGSFLFNSKIYEGSSLYASAIANKVIEVMDRQYAAAVPTTSSY 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00327 473 CDD bHLH_AtMYC1_like 280 346 IPR045896 -
Bva07g00327 473 Gene3D - 272 352 IPR036638 GO:0046983
Bva07g00327 473 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 278 341 IPR036638 GO:0046983
Bva07g00327 473 PANTHER TRANSCRIPTION FACTOR BHLH91 5 470 IPR045895 GO:0006355|GO:0048658
Bva07g00327 473 SMART finulus 281 330 IPR011598 GO:0046983
Bva07g00327 473 PANTHER TRANSCRIPTION FACTOR BHLH91 5 470 - -
Bva07g00327 473 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 275 324 IPR011598 GO:0046983
Bva07g00327 473 Pfam Helix-loop-helix DNA-binding domain 278 324 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00327 Bva-Chr7 4374853 4378649 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00327 5 471 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31210 38.340 1.52e-92 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva07g00327 HLH 8.6e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00327 - - gmx:100801349 570.081