Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00326 ATGGTCTCTTCTTTGCCCCTTTATCAGCCTAACCACTGCTTCCTCTCTAACATCCAGTTGAAAGGTTTGCGCAATGGCTTATTATGGCGACCCAGTAACTCATTTGGCAGTGACACCGAAATCAGGGTTCGCCCCATCAAAGCTTCAGTTGATACAGCTCCATTTCCATTGTTTCAACCTGGCAAAGTTGAAGAGTCACTCTCAGAATTGGAGCCAGTAGACCCGGATTTCTACAAGATAGGTTATGTACGAAGCATGCGAGCTTATGGAATTGAATTTAAGGAAGGGCCAGATGGATTTGGCGTGTATGCTTCCAAGGATGTAGAGCCTCTTCGCCGAGCCAGGGTTATAATGGAAATTCCTCTTGAATTGATGTTAACCATACGCCAGAAGCTTCCATGGATGTTTTTTCCTGACATAATTCCACTGGGTCATCCGATTTTTGATATCATCAATTCGACTAATCCAGAGACAGATTGGGACCTAAGGTTAGCGTGCCTTCTCTTATACGCTTTTGACCACAAGGACAACTTTTGGCAGTTATATGGTGATTTCCTACCTAGTGCTGATGAGTGCACTAGCTTACTTCTCGCTTCAGAGGATGAACTTTTGGAGCTACAGGATCCCAGTCTTGCTTCTACTATGAGAAACCAGCAACGCCGAGCCTTAGAGTTCTGGGAGAAGAACTGGCATAATGGTGCACCCCTTAAAATAATGCGTCTTGCTCGTGATCCTCGAAGGTTCCTTTGGGCAGTGGGTATTGCACAATCACGGTGTATTAACATGCAAATGAGGATTGGTGCCCTGCATCAAGATGCAAATATGTTGATTCCTTATGGTGATATGCTGAATCATTCATTTCAGCCAAATTGTTTTTTCCATTGGCGTTTTAAGGACCGGATGCTTGAGGTGCTTATAAATGCTGGTCAGCGGATTAGAAAGGGAGATGAGATGACCGTCAACTACATGAGCACACAGAAGAATGATATGTTCATGCAAAGATATGGATTTTCATCTTCCGTGAATCCTTGGGATGTGATCCAATTCTCAGGCAATGCACGTATTCATTTAGATTCCTTCTTGTCTGTATTCAATATATCCGGCCTTCCTGAAGAATATTACCATAACACAGGTCGTTTATCAAAAGTTGGAGATACTTTTGTTGACGGAGCAGTCATAGCTGCTGCACGAACGTTGCCCACTTGGTCAGATGGGGATGTGCCTCCAATTCCTAGTGTGGAAAGAAAGGCTGTGAAGGAGTTGCAAGAAGAATGTCAAAGGATGCTAGCAGAATATCCCACAACTTCTAAGCAAGACCAAAAATTGCTAGATTCTTCTCCAGAAGCTACAAGGACACTTGAAGCTGCATTAAAGTATAGATTGCACCGGAAACTATTCATAGAGAAAGTGTTCCAAGCACTGGAGATCTATCAAGAACGAATACTGTTCTG 1451 0.4342 MVSSLPLYQPNHCFLSNIQLKGLRNGLLWRPSNSFGSDTEIRVRPIKASVDTAPFPLFQPGKVEESLSELEPVDPDFYKIGYVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIMEIPLELMLTIRQKLPWMFFPDIIPLGHPIFDIINSTNPETDWDLRLACLLLYAFDHKDNFWQLYGDFLPSADECTSLLLASEDELLELQDPSLASTMRNQQRRALEFWEKNWHNGAPLKIMRLARDPRRFLWAVGIAQSRCINMQMRIGALHQDANMLIPYGDMLNHSFQPNCFFHWRFKDRMLEVLINAGQRIRKGDEMTVNYMSTQKNDMFMQRYGFSSSVNPWDVIQFSGNARIHLDSFLSVFNISGLPEEYYHNSRLSKVGDTFVDGAVIAAARTLPTWSDGDVPPIPSVERKAVKELQEECQRMLAEYPTTSKQDQKLLDSSPEATRTLEAALKYRLHRKLFIEKVFQALEIYQERILF 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00326 482 PANTHER PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 14 48 475 - -
Bva07g00326 482 Coils Coil 417 437 - -
Bva07g00326 482 CDD SET_LSMT 90 337 - -
Bva07g00326 482 Pfam Rubisco LSMT substrate-binding 412 463 IPR015353 -
Bva07g00326 482 Pfam SET domain 99 322 IPR001214 GO:0005515
Bva07g00326 482 Gene3D - 335 480 IPR036464 -
Bva07g00326 482 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 334 478 IPR036464 -
Bva07g00326 482 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 48 475 - -
Bva07g00326 482 ProSiteProfiles SET domain profile. 78 323 IPR001214 GO:0005515
Bva07g00326 482 Gene3D set domain protein methyltransferase, domain 1 83 334 - -
Bva07g00326 482 SUPERFAMILY SET domain 98 337 IPR046341 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bva07g00326 SET 1.7e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00326 - - gmx:100790985 828.55