Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00258 ATGGGACGCGTCAGAACTAAGACGGTGAAGAAATCCTCGCGCCAAGTAATCGAGCGCTATTACTCGCGCATGACCCTAGACTTTCACATCAACAAGAAGATTCTGGAAGAAGTTGCCATCATCCCCTCCAAGAGGCTCCGCAACAAGATCGCCGGGTTCTCCACCCATCTCATGAAGCGCATTCAGAAGGGTTCCGTTCGCGGAATCTCCCTGAAGCTGCAAGAGGAGGAGCGCGAGCGCAGAATGGACTTCGTTCCCGATGTTTCCGCCATCAGAACCGAGAACATCGAAGTCGACAAAGAGACACTTGACATGCTCAACGCTCTGGGAATGAACGAGATTCCCGGTCTCGTTCAAGTTGATCCTACAGCTGTGCAGCCGCAGCAGGGCTTCGGGTTTGGTCGGCCCAGGAGGTACTG 419 0.5418 MGRVRTKTVKKSSRQVIERYYSRMTLDFHINKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGSVRGISLKLQEEERERRMDFVPDVSAIRTENIEVDKETLDMLNALGMNEIPGLVQVDPTAVQPQQGFGFGRPRRY 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00258 139 PANTHER 40S RIBOSOMAL PROTEIN S17 1 138 - -
Bva07g00258 139 Gene3D - 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Bva07g00258 139 Hamap 30S ribosomal protein S17e [rps17e]. 1 63 IPR001210 GO:0003735|GO:0005840|GO:0006412
Bva07g00258 139 ProSitePatterns Ribosomal protein S17e signature. 41 56 IPR018273 GO:0003735|GO:0005840|GO:0006412
Bva07g00258 139 PANTHER 40S RIBOSOMAL PROTEIN S17 1 138 IPR001210 GO:0003735|GO:0005840|GO:0006412
Bva07g00258 139 SUPERFAMILY Rps17e-like 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Bva07g00258 139 Pfam Ribosomal S17 1 120 IPR001210 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00258 Bva-Chr7 3767049 3767736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00258 1 139 Cytoplasmic Ribosomal Protein Gene Family AT5G04800 80.851 5.69e-78 225